Research Output

2020

Aberrant energy metabolism and redox balance in seizure onset zones of epileptic patients

Grove, R. A., Madhavan, D., Boone, C. H. T., Braga, C. P., Papackova, Z., Kyllo, H., Samson, K., Simeone, K., Simeone, T., Helikar, T., Hanson, C. K. & Adamec, J., Jul 15 2020, In : Journal of Proteomics. 223, 103812.

Research output: Contribution to journalArticle

An evidence for surface expression of an immunogenic epitope of sarcoplasmic/endoplasmic reticulum calcium-ATPase2a on antigen-presenting cells from naive mice in the mediation of autoimmune myocarditis

Arumugam, R., Yalaka, B., Massilamany, C., Haider Ali, M. S. S., Lasrado, N., Jayaraja, S., Riethoven, J. J., Sun, X. & Reddy, J., Mar 2020, In : Immunobiology. 225, 2, 151896.

Research output: Contribution to journalArticle

A novel assessment system of toxicity and stability of CuO nanoparticles via copper super sensitive Saccharomyces cerevisiae mutants

Chen, X., Zhang, R., Sun, J., Simth, N., Zhao, M., Lee, J., Ke, Q. & Wu, X., Dec 2020, In : Toxicology in Vitro. 69, 104969.

Research output: Contribution to journalArticle

Aphid-Responsive Defense Networks in Hybrid Switchgrass

Koch, K. G., Palmer, N. A., Donze-Reiner, T., Scully, E. D., Seravalli, J., Amundsen, K., Twigg, P., Louis, J., Bradshaw, J. D., Heng-Moss, T. M. & Sarath, G., Jul 30 2020, In : Frontiers in Plant Science. 11, 1145.

Research output: Contribution to journalArticle

Open Access
Open Access

Author Correction: Characterization of a recurrent missense mutation in the forkhead DNA-binding domain of FOXP1 (Scientific Reports, (2018), 8, 1, (16161), 10.1038/s41598-018-34437-0)

Johnson, T. B., Mechels, K., Anderson, R. H., Cain, J. T., Sturdevant, D. A., Braddock, S., Pinz, H., Wilson, M. A., Landsverk, M., Roux, K. J. & Weimer, J. M., Dec 1 2020, In : Scientific reports. 10, 1, 6635.

Research output: Contribution to journalComment/debate

Open Access

Bipolar Nanoimpact Transients: Controlling the Redox Potential of Nanoparticles in Solution

Markham, J., Young, N. P., Batchelor-Mcauley, C. & Compton, R. G., Jun 25 2020, In : Journal of Physical Chemistry C. 124, 25, p. 14043-14053 11 p.

Research output: Contribution to journalArticle

Cautionary Tale of Using Tris(alkyl)phosphine Reducing Agents with NAD+-Dependent Enzymes

Patel, S. M., Smith, T. G., Morton, M., Stiers, K. M., Seravalli, J., Mayclin, S. J., Edwards, T. E., Tanner, J. J. & Becker, D. F., Sep 15 2020, In : Biochemistry. 59, 36, p. 3285-3289 5 p.

Research output: Contribution to journalArticle

Combined TLR4 and TLR9 agonists induce distinct phenotypic changes in innate immunity in vitro and in vivo

Lampe, A. T., Puniya, B. L., Pannier, A. K., Helikar, T. & Brown, D. M., Sep 2020, In : Cellular Immunology. 355, 104149.

Research output: Contribution to journalArticle

Comparative transcriptome analysis of endemic and epidemic Kaposi's sarcoma (KS) lesions and the secondary role of HIV-1 in KS pathogenesis

Lidenge, S. J., Kossenkov, A. V., Tso, F. Y., Wickramasinghe, J., Privatt, S. R., Ngalamika, O., Ngowi, J. R., Mwaiselage, J., Lieberman, P. M., West, J. T. & Wood, C., Jul 2020, In : PLoS pathogens. 16, 7, e1008681.

Research output: Contribution to journalArticle

Open Access

Covalent Modification of the Flavin in Proline Dehydrogenase by Thiazolidine-2-Carboxylate

Campbell, A. C., Becker, D. F., Gates, K. S. & Tanner, J. J., Apr 17 2020, In : ACS chemical biology. 15, 4, p. 936-944 9 p.

Research output: Contribution to journalArticle

Deletion of fatty acid transport protein 2 (FATP2) in the mouse liver changes the metabolic landscape by increasing the expression of PPARα-regulated genes

Perez, V. M., Gabell, J., Behrens, M., Wase, N., DiRusso, C. C. & Black, P. N., Apr 24 2020, In : Journal of Biological Chemistry. 295, 17, p. 5737-5750 14 p.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Differences in blood-derived francisella tularensis type b strains from clinical cases of tularemia

Larson, M. A., Abdalhamid, B., Puniya, B. L., Helikar, T., Kelley, D. W. & Iwen, P. C., Oct 2020, In : Microorganisms. 8, 10, p. 1-11 11 p., 1515.

Research output: Contribution to journalArticle

Open Access

Editorial: Special Issue on mitochondrial fidelity

Khalimonchuk, O., Mar 2020, In : Mitochondrion. 51, p. 104 1 p.

Research output: Contribution to journalEditorial

Engineering Carboxylic Acid Reductase (CAR) through a Whole-Cell Growth-Coupled NADPH Recycling Strategy

Kramer, L., Le, X., Rodriguez, M., Wilson, M. A., Guo, J. & Niu, W., Jul 17 2020, In : ACS Synthetic Biology. 9, 7, p. 1632-1637 6 p.

Research output: Contribution to journalArticle

1 Scopus citations

Healthy pregnancies and essential fats: Focus group discussions with Zambian women on dietary need and acceptability of a novel RUSF containing fish oil DHA

Chunda-Liyoka, C., Lubeya, M. K., Imakando, M., Kisling, S., Majid, S., Willis, M. S., Wood, C., Kankasa, C. & Dirusso, C. C., Feb 10 2020, In : BMC Pregnancy and Childbirth. 20, 1, 93.

Research output: Contribution to journalArticle

Open Access

HIV-1 subtypes and drug resistance mutations among female sex workers varied in different cities and regions of the Democratic Republic of Congo

Kwon, E. H., Musema, G. M. A., Boelter, J., Townsend, S., Tshala-Katumbay, D., Kayembe, P. K., West, J. & Wood, C., Feb 1 2020, In : PloS one. 15, 2, e0228670.

Research output: Contribution to journalArticle

Open Access

How the Cervical Microbiota Contributes to Cervical Cancer Risk in Sub-Saharan Africa

Klein, C., Kahesa, C., Mwaiselage, J., West, J. T., Wood, C. & Angeletti, P. C., Feb 12 2020, In : Frontiers in Cellular and Infection Microbiology. 10, 23.

Research output: Contribution to journalReview article

Open Access
1 Scopus citations

Interactive learning modules with 3D printed models improve student understanding of protein structure–function relationships

Howell, M. E., Booth, C. S., Sikich, S. M., Helikar, T., van Dijk, K., Roston, R. L. & Couch, B. A., Jul 1 2020, In : Biochemistry and Molecular Biology Education. 48, 4, p. 356-368 13 p.

Research output: Contribution to journalArticle

Lack of CD8+ T-cell co-localization with Kaposi's sarcoma-associated herpesvirus infected cells in Kaposi's sarcoma tumors

Lidenge, S. J., Tso, F. Y., Ngalamika, O., Kolape, J., Ngowi, J. R., Mwaiselage, J., Wood, C. & West, J. T., Apr 28 2020, In : Oncotarget. 11, 17, p. 1556-1572 17 p.

Research output: Contribution to journalArticle

Open Access

Long noncoding RNA SNHG12 integrates a DNA-PK–mediated DNA damage response and vascular senescence

Haemmig, S., Yang, D., Sun, X., Das, D., Ghaffari, S., Molinaro, R., Chen, L., Deng, Y., Freeman, D., Moullan, N., Tesmenitsky, Y., Wara, A. K. M. K., Simion, V., Shvartz, E., Lee, J. F., Yang, T., Sukova, G., Marto, J. A., Stone, P. H., Lee, W. L. & 3 others, Auwerx, J., Libby, P. & Feinberg, M. W., Feb 19 2020, In : Science translational medicine. 12, 532, eaaw1868.

Research output: Contribution to journalArticle

2 Scopus citations

Lubrication characteristics of wax esters from oils produced by a genetically-enhanced oilseed crop

Shirani, A., Joy, T., Lager, I., Yilmaz, J. L., Wang, H. L., Jeppson, S., Cahoon, E. B., Chapman, K., Stymne, S. & Berman, D., Jun 2020, In : Tribology International. 146, 106234.

Research output: Contribution to journalArticle

2 Scopus citations

Metabolic engineering of soybean seeds for enhanced vitamin E tocochromanol content and effects on oil antioxidant properties in polyunsaturated fatty acid-rich germplasm

Konda, A. R., Nazarenus, T. J., Nguyen, H., Yang, J., Gelli, M., Swenson, S., Shipp, J. M., Schmidt, M. A., Cahoon, R. E., Ciftci, O. N., Zhang, C., Clemente, T. E. & Cahoon, E. B., Jan 2020, In : Metabolic Engineering. 57, p. 63-73 11 p.

Research output: Contribution to journalArticle

2 Scopus citations

Metalloproteomic approach of mercury-binding proteins in liver and kidney tissues of Plagioscion squamosissimus (corvina) and Colossoma macropomum (tambaqui) from Amazon region: Possible identification of mercury contamination biomarkers

Bittarello, A. C., Vieira, J. C. S., Braga, C. P., da Cunha Bataglioli, I., de Oliveira, G., Rocha, L. C., Zara, L. F., Buzalaf, M. A. R., de Oliveira, L. C. S., Adamec, J. & de Magalhães Padilha, P., Apr 1 2020, In : Science of the Total Environment. 711, 134547.

Research output: Contribution to journalArticle

4 Scopus citations

Mitochondrial-nuclear heme trafficking in budding yeast is regulated by GTPases that control mitochondrial dynamics and ER contact sites

Martinez-Guzman, O., Willoughby, M. M., Saini, A., Dietz, J. V., Bohovych, I., Medlock, A. E., Khalimonchuk, O. & Reddi, A. R., May 2020, In : Journal of cell science. 133, 10, 237917.

Research output: Contribution to journalArticle

Open Access

Modeling Diffusion and Chemical Reactions to Analyze Redox-Based Molecular-Electrical Communication

Gorla, K. R., Barker, T. & Pierobon, M., Jun 2020, 2020 IEEE International Conference on Communications, ICC 2020 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 9148750. (IEEE International Conference on Communications; vol. 2020-June).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mycoplasma co-infection is associated with cervical cancer risk

Klein, C., Samwel, K., Kahesa, C., Mwaiselage, J., West, J. T., Wood, C. & Angeletti, P. C., May 2020, In : Cancers. 12, 5, 1093.

Research output: Contribution to journalArticle

Open Access

Oil crops for the future

Ortiz, R., Geleta, M., Gustafsson, C., Lager, I., Hofvander, P., Löfstedt, C., Cahoon, E. B., Minina, E., Bozhkov, P. & Stymne, S., Aug 2020, In : Current Opinion in Plant Biology. 56, p. 181-189 9 p.

Research output: Contribution to journalReview article

3 Scopus citations

Outcome markers of ART-treated HIV+ patients with early stage Kaposi's sarcoma

Ngalamika, O., Tso, F. Y., Lidenge, S., Munsaka, S., Shea, D., Wood, C. & West, J., Jul 2020, In : PloS one. 15, 7, e0235865.

Research output: Contribution to journalArticle

Open Access

Palmitvaccenic Acid (Δ11- cis-hexadecenoic acid) Is Synthesized by an OLE1-like Desaturase in the Arbuscular Mycorrhiza Fungus Rhizophagus irregularis

Brands, M., Cahoon, E. B. & Dörmann, P., Mar 24 2020, In : Biochemistry. 59, 11, p. 1163-1172 10 p.

Research output: Contribution to journalArticle

Plant unusual fatty acids: learning from the less common

Cahoon, E. B. & Li-Beisson, Y., Jun 2020, In : Current Opinion in Plant Biology. 55, p. 66-73 8 p.

Research output: Contribution to journalReview article

Prevalence of Kaposi's sarcoma-associated herpesvirus and transfusion-transmissible infections in Tanzanian blood donors

Lidenge, S. J., Tran, T., Tso, F. Y., Ngowi, J. R., Shea, D. M., Mwaiselage, J., Wood, C. & West, J. T., Jun 2020, In : International Journal of Infectious Diseases. 95, p. 204-209 6 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Proline metabolic dynamics and implications in drought tolerance of peanut plants

Furlan, A. L., Bianucci, E., Giordano, W., Castro, S. & Becker, D. F., Jun 2020, In : Plant Physiology and Biochemistry. 151, p. 566-578 13 p.

Research output: Contribution to journalArticle

4 Scopus citations

Prominent Receptors of Liver Sinusoidal Endothelial Cells in Liver Homeostasis and Disease

Pandey, E., Nour, A. S. & Harris, E. N., Jul 21 2020, In : Frontiers in Physiology. 11, 873.

Research output: Contribution to journalReview article

Open Access
Open Access

RGPDB: database of root-associated genes and promoters in maize, soybean, and sorghum

Moisseyev, G., Park, K., Cui, A., Freitas, D., Rajagopal, D., Konda, A. R., Martin-Olenski, M., Mcham, M., Liu, K., Du, Q., Schnable, J. C., Moriyama, E. N., Cahoon, E. B. & Zhang, C., Jan 1 2020, In : Database : the journal of biological databases and curation. 2020

Research output: Contribution to journalArticle

Open Access

Role of the hyaluronan receptor, stabilin-2/hare, in health and disease

Harris, E. N. & Baker, E., May 2 2020, In : International journal of molecular sciences. 21, 10, 3504.

Research output: Contribution to journalReview article

Open Access
2 Scopus citations

Sex Differences in the Reward-Enhancing Effects of Nicotine on Ethanol Reinforcement: A Reinforcer Demand Analysis

Barrett, S. T., Thompson, B. M., Emory, J. R., Larsen, C. E., Pittenger, S. T., Harris, E. N. & Bevins, R. A., Feb 6 2020, In : Nicotine and Tobacco Research. 22, 2, p. 238-247 10 p.

Research output: Contribution to journalArticle

2 Scopus citations

Stearidonic-Enriched Soybean Oil Modulates Obesity, Glucose Metabolism, and Fatty Acid Profiles Independently of Akkermansia muciniphila

Segura Munoz, R. R., Quach, T., Gomes-Neto, J. C., Xian, Y., Pena, P. A., Weier, S., Pellizzon, M. A., Kittana, H., Cody, L. A., Geis, A. L., Heck, K., Schmaltz, R. J., Bindels, L. B., Cahoon, E. B., Benson, A. K., Clemente, T. E. & Ramer-Tait, A. E., Sep 1 2020, In : Molecular Nutrition and Food Research. 64, 17, 2000162.

Research output: Contribution to journalArticle

Structural basis of non-canonical transcriptional regulation by the σa-bound iron-sulfur protein WhiB1 in M. tuberculosis

Wan, T., Li, S., Beltran, D. G., Schacht, A., Zhang, L., Becker, D. F. & Zhang, L. M., Jan 24 2020, In : Nucleic acids research. 48, 2, p. 501-516 16 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Systematic age-, organ-, and diet-associated ionome remodeling and the development of ionomic aging clocks

Zhang, B., Podolskiy, D. I., Mariotti, M., Seravalli, J. & Gladyshev, V. N., May 1 2020, In : Aging cell. 19, 5, e13119.

Research output: Contribution to journalArticle

Open Access

The genome evolution and domestication of tropical fruit mango

Wang, P., Luo, Y., Huang, J., Gao, S., Zhu, G., Dang, Z., Gai, J., Yang, M., Zhu, M., Zhang, H., Ye, X., Gao, A., Tan, X., Wang, S., Wu, S., Cahoon, E. B., Bai, B., Zhao, Z., Li, Q., Wei, J. & 9 others, Chen, H., Luo, R., Gong, D., Tang, K., Zhang, B., Ni, Z., Huang, G., Hu, S. & Chen, Y., Mar 6 2020, In : Genome biology. 21, 1, 60.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

The kaposi's sarcoma-associated herpesvirus (KSHV) gH/gL Complex is the predominant neutralizing antigenic determinant in KSHV-infected individuals

Mortazavi, Y., Lidenge, S. J., Tran, T., West, J. T., Wood, C. & Tso, F. Y., 2020, In : Viruses. 12, 3, 256.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

The lipid flippases ALA4 and ALA5 play critical roles in cell expansion and plant growth

Davis, J. A., Pares, R. B., Bernstein, T., McDowell, S. C., Brown, E., Stubrich, J., Rosenberg, A., Cahoon, E. B., Cahoon, R. E., Poulsen, L. R., Palmgren, M., López-Marqués, R. L. & Harper, J. F., Apr 2020, In : Plant physiology. 182, 4, p. 2111-2125 15 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Thioproline formation as a driver of formaldehyde toxicity in Escherichia coli

Patterson, J. A., He, H., Folz, J. S., Li, Q., Wilson, M. A., Fiehn, O., Bruner, S. D., Bar-Even, A. & Hanson, A. D., May 2020, In : Biochemical Journal. 477, 9, p. 1745-1757 13 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Thioredoxin regulates human mercaptopyruvate sulfurtransferase at physiologically-relevant concentrations

Yadav, P. K., Vitvitsky, V., Carballal, S., Seravalli, J. & Banerjee, R., May 8 2020, In : Journal of Biological Chemistry. 295, 19, p. 6299-6310 12 p.

Research output: Contribution to journalArticle

3 Scopus citations

Unregulated sphingolipid biosynthesis in gene-edited arabidopsis ORM mutants results in nonviable seeds with strongly reduced oil content[OPEN]

Gonzalez-Solis, A., Han, G., Gan, L., Li, Y., Markham, J. E., Cahoon, R. E., Dunn, T. M. & Cahoon, E. B., Aug 2020, In : Plant Cell. 32, 8, p. 2474-2490 17 p.

Research output: Contribution to journalArticle

Open Access

Using concept maps to characterise cellular respiration knowledge in undergraduate students

Bergan-Roller, H. E., Galt, N. J., Helikar, T. & Dauer, J. T., Jan 1 2020, In : Journal of Biological Education. 54, 1, p. 33-46 14 p.

Research output: Contribution to journalArticle

4 Scopus citations