College of Agricultural Sciences & Natural Resources

2023

The diet-microbiota axis: a key regulator of intestinal permeability in human health and disease

Lama Tamang, R., Juritsch, A. F., Ahmad, R., Salomon, J. D., Dhawan, P., Ramer-Tait, A. E. & Singh, A. B., 2023, In: Tissue Barriers. 11, 2, 2077069.

Research output: Contribution to journal › Review article › peer-review

Open Access

10 Scopus citations

2022

Addressing barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology

Niarakis, A., Waltemath, D., Glazier, J., Schreiber, F., Keating, S. M., Nickerson, D., Chaouiya, C., Siegel, A., Noël, V., Hermjakob, H., Helikar, T., Soliman, S. & Calzone, L., Jul 1 2022, In: Briefings in bioinformatics. 23, 4, bbac212.

Research output: Contribution to journal › Review article › peer-review

Open Access

15 Scopus citations

Allergen quantitative risk assessment within food operations: Concepts towards development of practical guidance based on an ILSI Europe workshop

Participants in the ILSI Europe Virtual Workshop of 29th October 2020, Aug 2022, In: Food Control. 138, 108917.

Research output: Contribution to journal › Review article › peer-review

Open Access

17 Scopus citations

A Review of Radiation-Induced Alterations of Multi-Omic Profiles, Radiation Injury Biomarkers, and Countermeasures

Shakyawar, S. K., Mishra, N. K., Vellichirammal, N. N., Cary, L., Helikar, T., Powers, R., Oberley-Deegan, R. E., Berkowitz, D. B., Bayles, K. W., Singh, V. K. & Guda, C., Nov 11 2022, In: Radiation Research. 199, 1, p. 89-111 23 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

19 Scopus citations

Arsenic Toxicity on Metabolism and Autophagy in Adipose and Muscle Tissues

Ro, S. H., Bae, J., Jang, Y., Myers, J. F., Chung, S., Yu, J., Natarajan, S. K., Franco, R. & Song, H. S., Apr 2022, In: Antioxidants. 11, 4, 689.

Research output: Contribution to journal › Review article › peer-review

Open Access

12 Scopus citations

Assessment of Methodological Pipelines for the Determination of Isothiocyanates Derived from Natural Sources

Kyriakou, S., Trafalis, D. T., Deligiorgi, M. V., Franco, R., Pappa, A. & Panayiotidis, M. I., Apr 2022, In: Antioxidants. 11, 4, 642.

Research output: Contribution to journal › Review article › peer-review

Open Access

8 Scopus citations

Better together: Protein partnerships for lineage-specific oil accumulation

Busta, L., Chapman, K. D. & Cahoon, E. B., Apr 2022, In: Current Opinion in Plant Biology. 66, 102191.

Research output: Contribution to journal › Review article › peer-review

Open Access

14 Scopus citations

Building digital twins of the human immune system: toward a roadmap

Laubenbacher, R., Niarakis, A., Helikar, T., An, G., Shapiro, B., Malik-Sheriff, R. S., Sego, T. J., Knapp, A., Macklin, P. & Glazier, J. A., Dec 2022, In: npj Digital Medicine. 5, 1, 64.

Research output: Contribution to journal › Review article › peer-review

Open Access

81 Scopus citations

Cannabis-related allergies: An international overview and consensus recommendations

The International Cannabis Allergy Collaboration, Jul 2022, In: Allergy: European Journal of Allergy and Clinical Immunology. 77, 7, p. 2038-2052 15 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

38 Scopus citations

Comprehensive Review of γ-Glutamyl Peptides (γ-GPs) and Their Effect on Inflammation Concerning Cardiovascular Health

Guha, S. & Majumder, K., Jul 6 2022, In: Journal of Agricultural and Food Chemistry. 70, 26, p. 7851-7870 20 p.

Research output: Contribution to journal › Review article › peer-review

32 Scopus citations

Determinants of Virus Variation, Evolution, and Host Adaptation

LaTourrette, K. & Garcia-Ruiz, H., Sep 2022, In: Pathogens. 11, 9, 1039.

Research output: Contribution to journal › Review article › peer-review

Open Access

42 Scopus citations

Genetics of Thoroughbred Racehorse Performance

Bailey, E., Petersen, J. L. & Kalbfleisch, T. S., Feb 2022, In: Annual Review of Animal Biosciences. 10, p. 131-150 20 p.

Research output: Contribution to journal › Review article › peer-review

16 Scopus citations

Guidelines on models of diabetic heart disease

Heather, L. C., Hafstad, A. D., Halade, G. V., Harmancey, R., Mellor, K. M., Mishra, P. K., Mulvihill, E. E., Nabben, M., Nakamura, M., Rider, O. J., Ruiz, M., Wende, A. R. & Ussher, J. R., Jul 2022, In: American Journal of Physiology - Heart and Circulatory Physiology. 323, 1, p. H176-H200

Research output: Contribution to journal › Review article › peer-review

Open Access

47 Scopus citations

Harnessing Mycobacterium bovis BCG Trained Immunity to Control Human and Bovine Babesiosis

Bastos, R. G., Alzan, H. F., Rathinasamy, V. A., Cooke, B. M., Dellagostin, O. A., Barletta, R. G. & Suarez, C. E., Jan 2022, In: Vaccines. 10, 1, 123.

Research output: Contribution to journal › Review article › peer-review

Open Access

9 Scopus citations

Mapping Enzyme Landscapes by Time-Resolved Crystallography with Synchrotron and X-Ray Free Electron Laser Light

Wilson, M. A., 2022, In: Annual Review of Biophysics. 51, p. 79-98 20 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

21 Scopus citations

Milk exosomes in nutrition and drug delivery

Ngu, A., Wang, S., Wang, H., Khanam, A. & Zempleni, J., May 2022, In: American Journal of Physiology - Cell Physiology. 322, 5, p. C865-C874

Research output: Contribution to journal › Review article › peer-review

Open Access

30 Scopus citations

NMR and Metabolomics—A Roadmap for the Future

Wishart, D. S., Cheng, L. L., Copié, V., Edison, A. S., Eghbalnia, H. R., Hoch, J. C., Gouveia, G. J., Pathmasiri, W., Powers, R., Schock, T. B., Sumner, L. W. & Uchimiya, M., Aug 2022, In: Metabolites. 12, 8, 678.

Research output: Contribution to journal › Review article › peer-review

Open Access

106 Scopus citations

Recent advances in understanding of fungal and oomycete effectors

Wilson, R. A. & McDowell, J. M., Aug 2022, In: Current Opinion in Plant Biology. 68, 102228.

Research output: Contribution to journal › Review article › peer-review

Open Access

21 Scopus citations

Recent applications of quantitative systems pharmacology and machine learning models across diseases

Aghamiri, S. S., Amin, R. & Helikar, T., Feb 2022, In: Journal of Pharmacokinetics and Pharmacodynamics. 49, 1, p. 19-37 19 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

37 Scopus citations

Role of Specialized Pro-resolving Mediators in Reducing Neuroinflammation in Neurodegenerative Disorders

Ponce, J., Ulu, A., Hanson, C., Cameron-Smith, E., Bertoni, J., Wuebker, J., Fisher, A., Siu, K. C., Marmelat, V., Adamec, J. & Bhatti, D., Feb 17 2022, In: Frontiers in Aging Neuroscience. 14, 780811.

Research output: Contribution to journal › Review article › peer-review

Open Access

25 Scopus citations

Structural diversity, biosynthesis, and function of plant falcarin-type polyacetylenic lipids

Santos, P., Busta, L., Yim, W. C., Cahoon, E. B. & Kosma, D. K., May 13 2022, In: Journal of experimental botany. 73, 9, p. 2889-2904 16 p.

Research output: Contribution to journal › Review article › peer-review

13 Scopus citations

The Astounding World of Glycans from Giant Viruses

Speciale, I., Notaro, A., Abergel, C., Lanzetta, R., Lowary, T. L., Molinaro, A., Tonetti, M., Van Etten, J. L. & De Castro, C., Oct 26 2022, In: Chemical Reviews. 122, 20, p. 15717-15766 50 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

15 Scopus citations

The Future of Synbiotics: Rational Formulation and Design

Gomez Quintero, D. F., Kok, C. R. & Hutkins, R., Jul 22 2022, In: Frontiers in Microbiology. 13, 919725.

Research output: Contribution to journal › Review article › peer-review

Open Access

46 Scopus citations

Towards an integrative view of virus phenotypes

DeLong, J. P., Al-Sammak, M. A., Al-Ameeli, Z. T., Dunigan, D. D., Edwards, K. F., Fuhrmann, J. J., Gleghorn, J. P., Li, H., Haramoto, K., Harrison, A. O., Marston, M. F., Moore, R. M., Polson, S. W., Ferrell, B. D., Salsbery, M. E., Schvarcz, C. R., Shirazi, J., Steward, G. F., Van Etten, J. L. & Wommack, K. E., Feb 2022, In: Nature Reviews Microbiology. 20, 2, p. 83-94 12 p.

Research output: Contribution to journal › Review article › peer-review

21 Scopus citations

Two heads are better than one: current landscape of integrating QSP and machine learning: An ISoP QSP SIG white paper by the working group on the integration of quantitative systems pharmacology and machine learning

on behalf of the Working Group, Feb 2022, In: Journal of Pharmacokinetics and Pharmacodynamics. 49, 1, p. 5-18 14 p.

Research output: Contribution to journal › Review article › peer-review

40 Scopus citations

Variation on a theme: the structures and biosynthesis of specialized fatty acid natural products in plants

Scott, S., Cahoon, E. B. & Busta, L., Aug 2022, In: Plant Journal. 111, 4, p. 954-965 12 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

15 Scopus citations

2021

A dedicated flavin-dependent monooxygenase catalyzes the hydroxylation of demethoxyubiquinone into ubiquinone (coenzyme Q) in Arabidopsis

Latimer, S., Keene, S. A., Stutts, L. R., Berger, A., Bernert, A. C., Soubeyrand, E., Wright, J., Clarke, C. F., Block, A. K., Colquhoun, T. A., Elowsky, C., Christensen, A., Wilson, M. A. & Basset, G. J., Nov 1 2021, In: Journal of Biological Chemistry. 297, 5, 101283.

Research output: Contribution to journal › Review article › peer-review

Open Access

13 Scopus citations

Algal-based biofuel generation through flue gas and wastewater utilization: a sustainable prospective approach

Kothari, R., Ahmad, S., Pathak, V. V., Pandey, A., Kumar, A., Shankarayan, R., Black, P. N. & Tyagi, V. V., Aug 2021, In: Biomass Conversion and Biorefinery. 11, 4, p. 1419-1442 24 p.

Research output: Contribution to journal › Review article › peer-review

39 Scopus citations

Anti-nlrp3 inflammasome natural compounds: An update

Liu, B. & Yu, J., Feb 2021, In: Biomedicines. 9, 2, p. 1-19 19 p., 136.

Research output: Contribution to journal › Review article › peer-review

Open Access

22 Scopus citations

A perspective on pea allergy and pea allergens

Taylor, S. L., Marsh, J. T., Koppelman, S. J., Kabourek, J. L., Johnson, P. E. & Baumert, J. L., Oct 2021, In: Trends in Food Science and Technology. 116, p. 186-198 13 p.

Research output: Contribution to journal › Review article › peer-review

70 Scopus citations

ASAS-NANP SYMPOSIUM: Prospects for interactive and dynamic graphics in the era of data-rich animal science1

Morota, G., Cheng, H., Cook, D. & Tanaka, E., Feb 1 2021, In: Journal of animal science. 99, 2, skaa402.

Research output: Contribution to journal › Review article › peer-review

Open Access

10 Scopus citations

Carbohydrate epitopes currently recognized as targets for IgE antibodies

Platts-Mills, T. A., Hilger, C., Jappe, U., van Hage, M., Gadermaier, G., Spillner, E., Lidholm, J., Keshavarz, B., Aalberse, R. C., van Ree, R., Goodman, R. E. & Pomés, A., Aug 2021, In: Allergy: European Journal of Allergy and Clinical Immunology. 76, 8, p. 2383-2394 12 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

56 Scopus citations

Changes in subcellular localization of host proteins induced by plant viruses

Rodriguez-Peña, R., Mounadi, K. E. & Garcia-Ruiz, H., Apr 2021, In: Viruses. 13, 4, 677.

Research output: Contribution to journal › Review article › peer-review

Open Access

19 Scopus citations

Consumer valuation of and attitudes towards novel foods produced with new plant engineering techniques: A review

Beghin, J. C. & Gustafson, C. R., Oct 1 2021, In: Sustainability (Switzerland). 13, 20, 11348.

Research output: Contribution to journal › Review article › peer-review

Open Access

47 Scopus citations

Coronavirus disease 2019: A comprehensive review and meta-analysis on cardiovascular biomarkers

Qiang, Z., Wang, B., Garrett, B. C., Rainey, R. P. & Superko, H. R., May 1 2021, In: Current Opinion in Cardiology. 36, 3, p. 367-373 7 p.

Research output: Contribution to journal › Review article › peer-review

9 Scopus citations

Deciphering the mechanism of action of antitubercular compounds with metabolomics

Sakallioglu, I. T., Barletta, R. G., Dussault, P. H. & Powers, R., Jan 2021, In: Computational and Structural Biotechnology Journal. 19, p. 4284-4299 16 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

5 Scopus citations

Decoding the equine genome: Lessons from encode

Peng, S., Petersen, J. L., Bellone, R. R., Kalbfleisch, T., Kingsley, N. B., Barber, A. M., Cappelletti, E., Giulotto, E. & Finno, C. J., Nov 2021, In: Genes. 12, 11, 1707.

Research output: Contribution to journal › Review article › peer-review

Open Access

7 Scopus citations

Down the iron path: Mitochondrial iron homeostasis and beyond

Dietz, J. V., Fox, J. L. & Khalimonchuk, O., Sep 2021, In: Cells. 10, 9, 2198.

Research output: Contribution to journal › Review article › peer-review

Open Access

45 Scopus citations

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)¹

Klionsky, D. J., Abdel-Aziz, A. K., Abdelfatah, S., Abdellatif, M., Abdoli, A., Abel, S., Abeliovich, H., Abildgaard, M. H., Abudu, Y. P., Acevedo-Arozena, A., Adamopoulos, I. E., Adeli, K., Adolph, T. E., Adornetto, A., Aflaki, E., Agam, G., Agarwal, A., Aggarwal, B. B., Agnello, M. & Agostinis, P. & 2,909 others, Agrewala, J. N., Agrotis, A., Aguilar, P. V., Ahmad, S. T., Ahmed, Z. M., Ahumada-Castro, U., Aits, S., Aizawa, S., Akkoc, Y., Akoumianaki, T., Akpinar, H. A., Al-Abd, A. M., Al-Akra, L., Al-Gharaibeh, A., Alaoui-Jamali, M. A., Alberti, S., Alcocer-Gómez, E., Alessandri, C., Ali, M., Alim Al-Bari, M. A., Aliwaini, S., Alizadeh, J., Almacellas, E., Almasan, A., Alonso, A., Alonso, G. D., Altan-Bonnet, N., Altieri, D. C., Álvarez, É. M. C., Alves, S., Alves da Costa, C., Alzaharna, M. M., Amadio, M., Amantini, C., Amaral, C., Ambrosio, S., Amer, A. O., Ammanathan, V., An, Z., Andersen, S. U., Andrabi, S. A., Andrade-Silva, M., Andres, A. M., Angelini, S., Ann, D., Anozie, U. C., Ansari, M. Y., Antas, P., Antebi, A., Antón, Z., Anwar, T., Apetoh, L., Apostolova, N., Araki, T., Araki, Y., Arasaki, K., Araújo, W. L., Araya, J., Arden, C., Arévalo, M. A., Arguelles, S., Arias, E., Arikkath, J., Arimoto, H., Ariosa, A. R., Armstrong-James, D., Arnauné-Pelloquin, L., Aroca, A., Arroyo, D. S., Arsov, I., Artero, R., Asaro, D. M. L., Aschner, M., Ashrafizadeh, M., Ashur-Fabian, O., Atanasov, A. G., Au, A. K., Auberger, P., Auner, H. W., Aurelian, L., Autelli, R., Avagliano, L., Ávalos, Y., Aveic, S., Aveleira, C. A., Avin-Wittenberg, T., Aydin, Y., Ayton, S., Ayyadevara, S., Azzopardi, M., Baba, M., Backer, J. M., Backues, S. K., Bae, D. H., Bae, O. N., Bae, S. H., Baehrecke, E. H., Baek, A., Baek, S. H., Baek, S. H., Bagetta, G., Bagniewska-Zadworna, A., Bai, H., Bai, J., Bai, X., Bai, Y., Bairagi, N., Baksi, S., Balbi, T., Baldari, C. T., Balduini, W., Ballabio, A., Ballester, M., Balazadeh, S., Balzan, R., Bandopadhyay, R., Banerjee, S., Banerjee, S., Bánréti, Á., Bao, Y., Baptista, M. S., Baracca, A., Barbati, C., Bargiela, A., Barilà, D., Barlow, P. G., Barmada, S. J., Barreiro, E., Barreto, G. E., Bartek, J., Bartel, B., Bartolome, A., Barve, G. R., Basagoudanavar, S. H., Bassham, D. C., Bast, R. C., Basu, A., Batoko, H., Batten, I., Baulieu, E. E., Baumgarner, B. L., Bayry, J., Beale, R., Beau, I., Beaumatin, F., Bechara, L. R. G., Beck, G. R., Beers, M. F., Begun, J., Behrends, C., Behrens, G. M. N., Bei, R., Bejarano, E., Bel, S., Behl, C., Belaid, A., Belgareh-Touzé, N., Bellarosa, C., Belleudi, F., Belló Pérez, M., Bello-Morales, R., Beltran, J. S. D. O., Beltran, S., Benbrook, D. M., Bendorius, M., Benitez, B. A., Benito-Cuesta, I., Bensalem, J., Berchtold, M. W., Berezowska, S., Bergamaschi, D., Bergami, M., Bergmann, A., Berliocchi, L., Berlioz-Torrent, C., Bernard, A., Berthoux, L., Besirli, C. G., Besteiro, S., Betin, V. M., Beyaert, R., Bezbradica, J. S., Bhaskar, K., Bhatia-Kissova, I., Bhattacharya, R., Bhattacharya, S., Bhattacharyya, S., Bhuiyan, M. S., Bhutia, S. K., Bi, L., Bi, X., Biden, T. J., Bijian, K., Billes, V. A., Binart, N., Bincoletto, C., Birgisdottir, A. B., Bjorkoy, G., Blanco, G., Blas-Garcia, A., Blasiak, J., Blomgran, R., Blomgren, K., Blum, J. S., Boada-Romero, E., Boban, M., Boesze-Battaglia, K., Boeuf, P., Boland, B., Bomont, P., Bonaldo, P., Bonam, S. R., Bonfili, L., Bonifacino, J. S., Boone, B. A., Bootman, M. D., Bordi, M., Borner, C., Bornhauser, B. C., Borthakur, G., Bosch, J., Bose, S., Botana, L. M., Botas, J., Boulanger, C. M., Boulton, M. E., Bourdenx, M., Bourgeois, B., Bourke, N. M., Bousquet, G., Boya, P., Bozhkov, P. V., Bozi, L. H. M., Bozkurt, T. O., Brackney, D. E., Brandts, C. H., Braun, R. J., Braus, G. H., Bravo-Sagua, R., Bravo-San Pedro, J. M., Brest, P., Bringer, M. A., Briones-Herrera, A., Broaddus, V. C., Brodersen, P., Brodsky, J. L., Brody, S. L., Bronson, P. G., Bronstein, J. M., Brown, C. N., Brown, R. E., Brum, P. C., Brumell, J. H., Brunetti-Pierri, N., Bruno, D., Bryson-Richardson, R. J., Bucci, C., Buchrieser, C., Bueno, M., Buitrago-Molina, L. E., Buraschi, S., Buch, S., Buchan, J. R., Buckingham, E. M., Budak, H., Budini, M., Bultynck, G., Burada, F., Burgoyne, J. R., Burón, M. I., Bustos, V., Büttner, S., Butturini, E., Byrd, A., Cabas, I., Cabrera-Benitez, S., Cadwell, K., Cai, J., Cai, L., Cai, Q., Cairó, M., Calbet, J. A., Caldwell, G. A., Caldwell, K. A., Call, J. A., Calvani, R., Calvo, A. C., Calvo-Rubio Barrera, M., Camara, N. O. S., Camonis, J. H., Camougrand, N., Campanella, M., Campbell, E. M., Campbell-Valois, F. X., Campello, S., Campesi, I., Campos, J. C., Camuzard, O., Cancino, J., Candido de Almeida, D., Canesi, L., Caniggia, I., Canonico, B., Cantí, C., Cao, B., Caraglia, M., Caramés, B., Carchman, E. H., Cardenal-Muñoz, E., Cardenas, C., Cardenas, L., Cardoso, S. M., Carew, J. S., Carle, G. F., Carleton, G., Carloni, S., Carmona-Gutierrez, D., Carneiro, L. A., Carnevali, O., Carosi, J. M., Carra, S., Carrier, A., Carrier, L., Carroll, B., Carter, A. B., Carvalho, A. N., Casanova, M., Casas, C., Casas, J., Cassioli, C., Castillo, E. F., Castillo, K., Castillo-Lluva, S., Castoldi, F., Castori, M., Castro, A. F., Castro-Caldas, M., Castro-Hernandez, J., Castro-Obregon, S., Catz, S. D., Cavadas, C., Cavaliere, F., Cavallini, G., Cavinato, M., Cayuela, M. L., Cebollada Rica, P., Cecarini, V., Cecconi, F., Cechowska-Pasko, M., Cenci, S., Ceperuelo-Mallafré, V., Cerqueira, J. J., Cerutti, J. M., Cervia, D., Cetintas, V. B., Cetrullo, S., Chae, H. J., Chagin, A. S., Chai, C. Y., Chakrabarti, G., Chakrabarti, O., Chakraborty, T., Chakraborty, T., Chami, M., Chamilos, G., Chan, D. W., Chan, E. Y. W., Chan, E. D., Chan, H. Y. E., Chan, H. H., Chan, H., Chan, M. T. V., Chan, Y. S., Chandra, P. K., Chang, C. P., Chang, C., Chang, H. C., Chang, K., Chao, J., Chapman, T., Charlet-Berguerand, N., Chatterjee, S., Chaube, S. K., Chaudhary, A., Chauhan, S., Chaum, E., Checler, F., Cheetham, M. E., Chen, C. S., Chen, G. C., Chen, J. F., Chen, L. L., Chen, L., Chen, L., Chen, M., Chen, M. K., Chen, N., Chen, Q., Chen, R. H., Chen, S., Chen, W., Chen, W., Chen, X. M., Chen, X. W., Chen, X., Chen, Y., Chen, Y. G., Chen, Y., Chen, Y., Chen, Y. J., Chen, Y. Q., Chen, Z. S., Chen, Z., Chen, Z. H., Chen, Z. J., Chen, Z., Cheng, H., Cheng, J., Cheng, S. Y., Cheng, W., Cheng, X., Cheng, X. T., Cheng, Y., Cheng, Z., Chen, Z., Cheong, H., Cheong, J. K., Chernyak, B. V., Cherry, S., Cheung, C. F. R., Cheung, C. H. A., Cheung, K. H., Chevet, E., Chi, R. J., Chiang, A. K. S., Chiaradonna, F., Chiarelli, R., Chiariello, M., Chica, N., Chiocca, S., Chiong, M., Chiou, S. H., Chiramel, A. I., Chiurchiù, V., Cho, D. H., Choe, S. K., Choi, A. M. K., Choi, M. E., Choudhury, K. R., Chow, N. S., Chu, C. T., Chua, J. P., Chua, J. J. E., Chung, H., Chung, K. P., Chung, S., Chung, S. H., Chung, Y. L., Cianfanelli, V., Ciechomska, I. A., Cifuentes, M., Cinque, L., Cirak, S., Cirone, M., Clague, M. J., Clarke, R., Clementi, E., Coccia, E. M., Codogno, P., Cohen, E., Cohen, M. M., Colasanti, T., Colasuonno, F., Colbert, R. A., Colell, A., Čolić, M., Coll, N. S., Collins, M. O., Colombo, M. I., Colón-Ramos, D. A., Combaret, L., Comincini, S., Cominetti, M. R., Consiglio, A., Conte, A., Conti, F., Contu, V. R., Cookson, M. R., Coombs, K. M., Coppens, I., Corasaniti, M. T., Corkery, D. P., Cordes, N., Cortese, K., Costa, M. D. C., Costantino, S., Costelli, P., Coto-Montes, A., Crack, P. J., Crespo, J. L., Criollo, A., Crippa, V., Cristofani, R., Csizmadia, T., Cuadrado, A., Cui, B., Cui, J., Cui, Y., Cui, Y., Culetto, E., Cumino, A. C., Cybulsky, A. V., Czaja, M. J., Czuczwar, S. J., D’Adamo, S., D’Amelio, M., D’Arcangelo, D., D’Lugos, A. C., D’Orazi, G., da Silva, J. 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Research output: Contribution to journal › Review article › peer-review

1823 Scopus citations

Human body-fluid proteome: Quantitative profiling and computational prediction

Huang, L., Shao, D., Wang, Y., Cui, X., Li, Y., Chen, Q. & Cui, J., Jan 1 2021, In: Briefings in bioinformatics. 22, 1, p. 315-333 19 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

50 Scopus citations

IL-10 as a Th2 cytokine: Differences between mice and humans

Rasquinha, M. T., Sur, M., Lasrado, N. & Reddy, J., Nov 1 2021, In: Journal of Immunology. 207, 9, p. 2205-2215 11 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

46 Scopus citations

Immunomodulatory role of urolithin a on metabolic diseases

Toney, A. M., Fox, D., Chaidez, V., Ramer-Tait, A. E. & Chung, S., Feb 2021, In: Biomedicines. 9, 2, p. 1-18 18 p., 192.

Research output: Contribution to journal › Review article › peer-review

Open Access

60 Scopus citations

Inflammatory mediation of heat stress-induced growth deficits in livestock and its potential role as a target for nutritional interventions: A review

Most, M. S. & Yates, D. T., Dec 2021, In: Animals. 11, 12, 3539.

Research output: Contribution to journal › Review article › peer-review

Open Access

16 Scopus citations

Meta-analysis of soybean yield response to foliar fungicides evaluated from 2005 to 2018 in the United States and Canada

Kandel, Y. R., Hunt, C., Ames, K., Arneson, N., Bradley, C. A., Byamukama, E., Byrne, A., Chilvers, M. I., Giesler, L. J., Halvorson, J., Hooker, D. C., Kleczewski, N. M., Malvick, D. K., Markell, S., Potter, B., Pedersen, W., Smith, D. L., Tenuta, A. U., Telenko, D. E. P. & Wise, K. A. & 1 others, Mueller, D. S., May 2021, In: Plant disease. 105, 5

Research output: Contribution to journal › Review article › peer-review

Open Access

11 Scopus citations

Neurodegeneration: Impact of S-nitrosylated Parkin, DJ-1 and PINK1 on the pathogenesis of Parkinson's disease

Sircar, E., Rai, S. R., Wilson, M. A., Schlossmacher, M. G. & Sengupta, R., Jun 15 2021, In: Archives of Biochemistry and Biophysics. 704, 108869.

Research output: Contribution to journal › Review article › peer-review

21 Scopus citations

Overview of the Microbiome Among Nurses study (Micro-N) as an example of prospective characterization of the microbiome within cohort studies

Everett, C., Li, C., Wilkinson, J. E., Nguyen, L. H., McIver, L. J., Ivey, K., Izard, J., Palacios, N., Eliassen, A. H., Willett, W. C., Ascherio, A., Sun, Q., Tworoger, S. S., Chan, A. T., Garrett, W. S., Huttenhower, C., Rimm, E. B. & Song, M., Jun 2021, In: Nature protocols. 16, 6, p. 2724-2731 8 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

13 Scopus citations

Pathophysiological communication between hepatocytes and non-parenchymal cells in liver injury from NAFLD to liver fibrosis

Kumar, S., Duan, Q., Wu, R., Harris, E. N. & Su, Q., Sep 2021, In: Advanced Drug Delivery Reviews. 176, 113869.

Research output: Contribution to journal › Review article › peer-review

236 Scopus citations

Regulating Polyamine Metabolism by miRNAs in Diabetic Cardiomyopathy

Kambis, T. N., Tofilau, H. M. N., Gawargi, F. I., Chandra, S. & Mishra, P. K., Dec 2021, In: Current diabetes reports. 21, 12, 52.

Research output: Contribution to journal › Review article › peer-review

Open Access

11 Scopus citations

Ruminant milk-derived extracellular vesicles: A nutritional and therapeutic opportunity?

Ong, S. L., Blenkiron, C., Haines, S., Acevedo-Fani, A., Leite, J. A. S., Zempleni, J., Anderson, R. C. & McCann, M. J., Aug 2021, In: Nutrients. 13, 8, 2505.

Research output: Contribution to journal › Review article › peer-review

Open Access

27 Scopus citations

Setting the basis of best practices and standards for curation and annotation of logical models in biology - Highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop

Niarakis, A., Kuiper, M., Ostaszewski, M., Malik Sheriff, R. S., Casals-Casas, C., Thieffry, D., Freeman, T. C., Thomas, P., Touré, V., Noël, V., Stoll, G., Saez-Rodriguez, J., Naldi, A., Oshurko, E., Xenarios, I., Soliman, S., Chaouiya, C., Helikar, T. & Calzone, L., Mar 1 2021, In: Briefings in bioinformatics. 22, 2, p. 1848-1859 12 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

10 Scopus citations

College of Agricultural Sciences & Natural Resources

Research output

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