College of Agricultural Sciences & Natural Resources

Research Output

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Review article
2006

Cell Polarity in Filamentous Fungi: Shaping the Mold

Harris, S. D., 2006, In : International Review of Cytology. 251, p. 41-77 37 p.

Research output: Contribution to journalReview article

93 Scopus citations
16 Scopus citations

Food allergen labeling in the USA and Europe

Taylor, S. L. & Hefle, S. L., Jun 2006, In : Current opinion in allergy and clinical immunology. 6, 3, p. 186-190 5 p.

Research output: Contribution to journalReview article

76 Scopus citations

Identification of genes associated with ovarian cancer metastasis using microarray expression analysis

Lancaster, J. M., Dressman, H. K., Clarke, J. P., Sayer, R. A., Martino, M. A., Cragun, J. M., Henriott, A. H., Gray, J., Sutphen, R., Elahi, A., Whitaker, R. S., West, M., Marks, J. R., Nevins, J. R. & Berchuck, A., Sep 2006, In : International Journal of Gynecological Cancer. 16, 5, p. 1733-1745 13 p.

Research output: Contribution to journalReview article

56 Scopus citations

Potential roles of electrogenic ion transport and plasma membrane depolarization in apoptosis

Franco, R., Bortner, C. D. & Cidlowski, J. A., Jan 2006, In : Journal of Membrane Biology. 209, 1, p. 43-58 16 p.

Research output: Contribution to journalReview article

72 Scopus citations

Reactive oxygen species as signals that modulate plant stress responses and programmed cell death

Gechev, T. S., Van Breusegem, F., Stone, J. M., Denev, I. & Laloi, C., Nov 2006, In : BioEssays. 28, 11, p. 1091-1101 11 p.

Research output: Contribution to journalReview article

635 Scopus citations

Recent progresses in the application of machine learning approach for predicting protein functional class independent of sequence similarity.

Han, L., Cui, J., Lin, H., Ji, Z., Cao, Z., Li, Y. & Chen, Y., Jul 2006, In : Proteomics. 6, 14, p. 4023-4037 15 p.

Research output: Contribution to journalReview article

60 Scopus citations

Tannerella forsythia, a periodontal pathogen entering the genomic era

Tanner, A. C. R. & Izard, J., Oct 2006, In : Periodontology 2000. 42, 1, p. 88-113 26 p.

Research output: Contribution to journalReview article

88 Scopus citations
2005

AIDS and associated malignancies

Wood, C. & Harrington, W., 2005, In : Cell Research. 15, 11-12, p. 947-952 6 p.

Research output: Contribution to journalReview article

44 Scopus citations

Assessing genetically modified crops to minimize the risk of increased food allergy: A review

Goodman, R. E., Hefle, S. L., Taylor, S. L. & Van Ree, R., Jun 2005, In : International archives of allergy and immunology. 137, 2, p. 153-166 14 p.

Research output: Contribution to journalReview article

78 Scopus citations

Biogenesis of cytochrome c oxidase

Khalimonchuk, O. & Rödel, G., Dec 2005, In : Mitochondrion. 5, 6, p. 363-388 26 p.

Research output: Contribution to journalReview article

103 Scopus citations

Chlorovirus: A genus of Phycodnaviridae that infects certain chlorella-like green algae

Kang, M., Dunigan, D. D. & Van Etten, J. L., May 2005, In : Molecular Plant Pathology. 6, 3, p. 212-224 13 p.

Research output: Contribution to journalReview article

20 Scopus citations

Human safety and genetically modified plants: A review of antibiotic resistance markers and future transformation selection technologies

Goldstein, D. A., Tinland, B., Gilbertson, L. A., Staub, J. M., Bannon, G. A., Goodman, R. E., McCoy, R. L. & Silvanovich, A., 2005, In : Journal of Applied Microbiology. 99, 1, p. 7-23 17 p.

Research output: Contribution to journalReview article

68 Scopus citations

Plant organellar protein targeting: A traffic plan still under construction

Mackenzie, S. A., Oct 2005, In : Trends in Cell Biology. 15, 10, p. 548-554 7 p.

Research output: Contribution to journalReview article

74 Scopus citations

Proposed guidelines for a unified nomenclature and phylogenetic analysis of type III hop effector proteins in the plant pathogen Pseudomonas syringae

Lindeberg, M., Stavrinides, J., Chang, J. H., Alfano, J. R., Collmer, A., Dangl, J. L., Greenberg, J. T., Mansfield, J. W. & Guttman, D. S., Apr 2005, In : Molecular Plant-Microbe Interactions. 18, 4, p. 275-282 8 p.

Research output: Contribution to journalReview article

109 Scopus citations
25 Scopus citations

Uptake, localization, and noncarboxylase roles of biotin

Zempleni, J., 2005, In : Annual Review of Nutrition. 25, p. 175-196 22 p.

Research output: Contribution to journalReview article

129 Scopus citations
2004

Alternative NAD(P)H dehydrogenases of plant mitochondria

Rasmusson, A. G., Soole, K. L. & Elthon, T. E., 2004, In : Annual Review of Plant Biology. 55, p. 23-39 17 p.

Research output: Contribution to journalReview article

216 Scopus citations

Application of the genome sequence to address concerns that Mycobacterium avium subspecies paratuberculosis might be a foodborne pathogen.

Bannantine, J. P., Barletta, R. G., Stabel, J. R., Paustian, M. L. & Kapur, V., 2004, In : Foodborne pathogens and disease. 1, 1, p. 3-15 13 p.

Research output: Contribution to journalReview article

18 Scopus citations

Escherichia coli O157: H7: An update on intestinal colonization and virulence mechanisms

Moxley, R. A., Jun 2004, In : Animal health research reviews. 5, 1, p. 15-33 19 p.

Research output: Contribution to journalReview article

41 Scopus citations

Evolution of bovine viral diarrhea virus vaccines

Kelling, C. L., Mar 2004, In : Veterinary Clinics of North America - Food Animal Practice. 20, 1, p. 115-129 15 p.

Research output: Contribution to journalReview article

50 Scopus citations

Food allergy and the food industry

Hefle, S. L. & Taylor, S. L., Jan 2004, In : Current allergy and asthma reports. 4, 1, p. 55-59 5 p.

Research output: Contribution to journalReview article

22 Scopus citations

Glycosyltransferases encoded by viruses

Markine-Goriaynoff, N., Gillet, L., Van Etten, J. L., Korres, H., Verma, N. & Vanderplasschen, A., Oct 2004, In : Journal of General Virology. 85, 10, p. 2741-2754 14 p.

Research output: Contribution to journalReview article

67 Scopus citations

Identification of trace element-containing proteins in genomic databases

Gladyshev, V. N., Kryukov, G. V., Fomenko, D. E. & Hatfield, D. L., 2004, In : Annual Review of Nutrition. 24, p. 579-596 18 p.

Research output: Contribution to journalReview article

48 Scopus citations

Inactivación de genes de Mycobacterium tuberculosis y su potencial utilidad en la prevención y el control de la tuberculosis.

Translated title of the contribution: Gene inactivation in Mycobacterium tuberculosis and its use in tuberculosis control and preventionChacón, O., Realpe, T., Barletta, R. G. & Robledo, J., Jun 2004, In : Biomédica : revista del Instituto Nacional de Salud. 24 Supp 1, p. 165-187 23 p.

Research output: Contribution to journalReview article

Open Access

Information provision for allergic consumers - Where are we going with food allergen labelling?

Mills, E. N. C., Valovirta, E., Madsen, C., Taylor, S. L., Vieths, S., Anklam, E., Baumgartner, S., Koch, P., Crevel, R. W. R. & Frewer, L., Dec 2004, In : Allergy: European Journal of Allergy and Clinical Immunology. 59, 12, p. 1262-1268 7 p.

Research output: Contribution to journalReview article

77 Scopus citations

Johne's disease, inflammatory bowel disease, and Mycobacterium paratuberculosis

Chacon, O., Bermudez, L. E. & Barletta, R. G., 2004, In : Annual Review of Microbiology. 58, p. 329-363 35 p.

Research output: Contribution to journalReview article

194 Scopus citations

Management strategies to decrease calf death losses in beef herds

Larson, R. L., Tyler, J. W., Schultz, L. G., Tessman, R. K. & Hostetler, D. E., Jan 1 2004, In : Journal of the American Veterinary Medical Association. 224, 1, p. 42-48 7 p.

Research output: Contribution to journalReview article

13 Scopus citations

Nematode Molecular Diagnostics: From bands to barcodes

Powers, T., 2004, In : Annual Review of Phytopathology. 42, p. 367-383 17 p.

Research output: Contribution to journalReview article

127 Scopus citations

Osmolytes and Mechanisms Involved in Regulatory Volume Decrease under Conditions of Sudden or Gradual Osmolarity Decrease

Ordaz, B., Tuz, K., Ochoa, L. D., Lezama, R., Peña-Segura, C. & Franco, R., Jan 2004, In : Neurochemical Research. 29, 1, p. 65-72 8 p.

Research output: Contribution to journalReview article

26 Scopus citations

The application of X-ray, NMR, and molecular modeling in the design of MMP inhibitors

Rush, T. S. & Powers, R., 2004, In : Current Topics in Medicinal Chemistry. 4, 12, p. 1311-1327 17 p.

Research output: Contribution to journalReview article

44 Scopus citations

The latency-related gene encoded by bovine herpesvirus 1 can suppress caspase 3 and caspase 9 cleavage during productive infection

Henderson, G., Perng, G. C., Nesburn, A. B., Wechsler, S. L. & Jones, C., Feb 2004, In : Journal of neurovirology. 10, 1, p. 64-70 7 p.

Research output: Contribution to journalReview article

31 Scopus citations

Type III secretion system effector proteins: Double agents in bacterial disease and plant defense

Alfano, J. R. & Collmer, A., 2004, In : Annual Review of Phytopathology. 42, p. 385-414 30 p.

Research output: Contribution to journalReview article

545 Scopus citations
2003

A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes

Roberts, R. J., Belfort, M., Bestor, T., Bhagwat, A. S., Bickle, T. A., Bitinaite, J., Blumenthal, R. M., Degtyarev, S. K., Dryden, D. T. F., Dybvig, K., Firman, K., Gromova, E. S., Gumport, R. I., Halford, S. E., Hattman, S., Heitman, J., Hornby, D. P., Janulaitis, A., Jeltsch, A., Josephsen, J. & 27 others, Kiss, A., Klaenhammer, T. R., Kobayashi, I., Kong, H., Krüger, D. H., Lacks, S., Marinus, M. G., Miyahara, M., Morgan, R. D., Murray, N. E., Nagaraja, V., Piekarowicz, A., Pingoud, A., Raleigh, E., Rao, D. N., Reich, N., Repin, V. E., Selker, E. U., Shaw, P. C., Stein, D. C., Stoddard, B. L., Szybalski, W., Trautner, T. A., Van Etten, J. L., Vitor, J. M. B., Wilson, G. G. & Xu, S. Y., Apr 1 2003, In : Nucleic acids research. 31, 7, p. 1805-1812 8 p.

Research output: Contribution to journalReview article

461 Scopus citations

Cloning and initial characterization of an alternatively spliced transcript encoded by the bovine herpes virus 1 latency-related gene

Devireddy, L. R., Zhang, Y. & Jones, C. J., Dec 2003, In : Journal of neurovirology. 9, 6, p. 612-622 11 p.

Research output: Contribution to journalReview article

17 Scopus citations

Genomics perspective on disulfide bond formation

Fomenko, D. E. & Gladyshev, V. N., Aug 2003, In : Antioxidants and Redox Signaling. 5, 4, p. 397-402 6 p.

Research output: Contribution to journalReview article

15 Scopus citations

Herpes simplex virus type 1 and bovine herpesvirus 1 latency

Jones, C., Jan 2003, In : Clinical Microbiology Reviews. 16, 1, p. 79-95 17 p.

Research output: Contribution to journalReview article

206 Scopus citations

Industrial oils from transgenic plants

Jaworski, J. & Cahoon, E. B., Apr 2003, In : Current Opinion in Plant Biology. 6, 2, p. 178-184 7 p.

Research output: Contribution to journalReview article

123 Scopus citations

Microbial glutaminase: Biochemistry, molecular approaches and applications in the food industry

Nandakumar, R., Yoshimune, K., Wakayama, M. & Moriguchi, M., Sep 1 2003, In : Journal of Molecular Catalysis B: Enzymatic. 23, 2-6, p. 87-100 14 p.

Research output: Contribution to journalReview article

95 Scopus citations

Regulation of gene expression by biotin (review)

Rodriguez-Melendez, R. & Zempleni, J., Dec 2003, In : Journal of Nutritional Biochemistry. 14, 12, p. 680-690 11 p.

Research output: Contribution to journalReview article

99 Scopus citations

Systematic status of Campydora Cobb, 1920 (Nematoda: Campydorina)

Mullin, P. G., Harris, T. S. & Powers, T. O., 2003, In : Nematology. 5, 5, p. 699-711 13 p.

Research output: Contribution to journalReview article

15 Scopus citations

The role of Kaposi's sarcoma-associated herpesvirus/human herpesvirus-8 regulator of transcription activation (RTA) in control of gene expression

West, J. T. & Wood, C., Aug 11 2003, In : Oncogene. 22, 33 REV. ISS. 2, p. 5150-5163 14 p.

Research output: Contribution to journalReview article

93 Scopus citations

The safety of genetically modified foods produced through biotechnology

Hollingworth, R. M., Bjeldanes, L. F., Bolger, M., Kimber, I., Meade, B. J., Taylor, S. L. & Wallace, K. B., Jan 1 2003, In : Toxicological Sciences. 71, 1, p. 2-8 7 p.

Research output: Contribution to journalReview article

56 Scopus citations

Towards integrated clinico-genomic models for personalized medicine: Combining gene expression signatures and clinical factors in breast cancer outcomes prediction

Nevins, J. R., Huang, E. S., Dressman, H., Pittman, J., Huang, A. T. & West, M., Oct 15 2003, In : Human Molecular Genetics. 12, REV. ISS. 2, p. R153-R157

Research output: Contribution to journalReview article

Open Access
105 Scopus citations
152 Scopus citations

Unusual Life Style of Giant Chlorella Viruses

Van Etten, J. L., 2003, In : Annual Review of Genetics. 37, p. 153-195 43 p.

Research output: Contribution to journalReview article

146 Scopus citations
2002

Approaches to the safety assessment of novel foods and novel gene products

Taylor, S. L., May 2002, In : Comments on Toxicology. 8, 3, p. 241-250 10 p.

Research output: Contribution to journalReview article

Assessment of the allergenicity of foods produced through agricultural biotechnology

Taylor, S. L., 2002, In : ACS Symposium Series. 829, p. 205-216 12 p.

Research output: Contribution to journalReview article

Bean pod mottle virus: A threat to U.S. soybean production

Giesler, L. J., Ghabrial, S. A., Hunt, T. E. & Hill, J. H., Dec 1 2002, In : Plant disease. 86, 12, p. 1280-1289 10 p.

Research output: Contribution to journalReview article

Open Access
73 Scopus citations

Bioinformatic methods for identifying known or potential allergens in the safety assessment of genetically modified crops

Goodman, R. E., Silvanovich, A., Hileman, R. E., Bannon, G. A., Rice, E. A. & Astwood, J. D., May 2002, In : Comments on Toxicology. 8, 3, p. 251-269 19 p.

Research output: Contribution to journalReview article

17 Scopus citations