College of Information Science & Technology

Research Output

2020

A bag-of-words feature engineering approach for assessing health conditions using accelerometer data

Rastegari, E. & Ali, H., May 2020, In : Smart Health. 16, 100116.

Research output: Contribution to journalArticle

A Novel Prediction Model for Discovering Beneficial Effects of Natural Compounds in Drug Repurposing

Chandrababu, S. & Bastola, D., 2020, Bioinformatics and Biomedical Engineering - 8th International Work-Conference, IWBBIO 2020, Proceedings. Rojas, I., Valenzuela, O., Rojas, F., Herrera, L. J. & Ortuño, F. (eds.). Springer, p. 811-824 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12108 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A probabilistic infection model for efficient trace-prediction of disease outbreaks in contact networks

Qian, W., Bhowmick, S., O’Neill, M., Ramisetty-Mikler, S. & Mikler, A. R., 2020, Computational Science – ICCS 2020 - 20th International Conference, Proceedings. Krzhizhanovskaya, V. V., Závodszky, G., Lees, M. H., Sloot, P. M. A., Sloot, P. M. A., Sloot, P. M. A., Dongarra, J. J., Brissos, S. & Teixeira, J. (eds.). Springer, p. 676-689 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12137 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

Asymmetric Wake-up Scheduling based on Block Designs in Wireless Sensor Networks

Lee, W., Youn, J. H. & Song, T. S., May 2020, 2020 IEEE Wireless Communications and Networking Conference, WCNC 2020 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 9120739. (IEEE Wireless Communications and Networking Conference, WCNC; vol. 2020-May).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Changes in the community structure of the symbiotic microbes of wild amphibians from the eastern edge of the Tibetan Plateau

Xu, L. L., Chen, H., Zhang, M., Zhu, W., Chang, Q., Lu, G., Chen, Y., Jiang, J. & Zhu, L., Apr 1 2020, In : MicrobiologyOpen. 9, 4, e1004.

Research output: Contribution to journalArticle

Open Access

Computational Approaches for Drug Design: A Focus on Drug Repurposing

Kim, S., Thapa, I., Samadi, F. & Ali, H., 2020, Bioinformatics and Biomedical Engineering - 8th International Work-Conference, IWBBIO 2020, Proceedings. Rojas, I., Valenzuela, O., Rojas, F., Herrera, L. J. & Ortuño, F. (eds.). Springer, p. 213-223 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12108 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Criminal tendency detection from facial images and the gender bias effect

Hashemi, M. & Hall, M., Dec 1 2020, In : Journal of Big Data. 7, 1, 2.

Research output: Contribution to journalArticle

4 Scopus citations

Do Machines Replicate Humans? Toward a Unified Understanding of Radicalizing Content on the Open Social Web

Hall, M., Logan, M., Ligon, G. S. & Derrick, D. C., Mar 1 2020, In : Policy and Internet. 12, 1, p. 109-138 30 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Drivers and barriers to public acceptance of future energy sources and grid expansion in the United States

Sharpton, T., Lawrence, T. & Hall, M., Jul 2020, In : Renewable and Sustainable Energy Reviews. 126, 109826.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Epstein-barr virus epitope-major histocompatibility complex interaction combined with convergent recombination drives selection of diverse T cell receptor α and β repertoires

Gil, A., Kamga, L., Chirravuri-Venkata, R., Aslan, N., Clark, F., Ghersi, D., Luzuriaga, K. & Selin, L. K., Mar 1 2020, In : mBio. 11, 2, e00250-20.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Equitable Healthcare Provision: Uncovering the Impact of the Mobility Effect on Human Development

Qureshi, S. & Xiong, J., 2020, (Accepted/In press) In : Information Systems Management.

Research output: Contribution to journalArticle

1 Scopus citations

Evolution and genetics of bighead and silver carps: Native population conservation versus invasive species control

Lu, G., Wang, C., Zhao, J., Liao, X., Wang, J., Luo, M., Zhu, L., Bernatzhez, L. & Li, S., Jul 1 2020, In : Evolutionary Applications. 13, 6, p. 1351-1362 12 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Genomes of major fishes in world fisheries and aquaculture: Status, application and perspective

Lu, G. & Luo, M., Jul 2020, In : Aquaculture and Fisheries. 5, 4, p. 163-173 11 p.

Research output: Contribution to journalReview article

Open Access

Impact of age on patients' communication and technology preferences in the era of meaningful use: Mixed methods study

Clarke, M. A., Fruhling, A. L., Sitorius, M., Windle, T. A., Bernard, T. L. & Windle, J. R., Jun 1 2020, In : Journal of medical Internet research. 22, 6, e13470.

Research output: Contribution to journalArticle

Open Access

Lessons from bamboo-eating pandas and their gut microbiome: Gut microbiome flow and applications

Zhang, Z., Hu, T., Lu, G. & Zhu, L., Apr 1 2020, In : Evolutionary Applications. 13, 4, p. 615-619 5 p.

Research output: Contribution to journalArticle

Open Access

Machine learning approach for foot-side classification using a single wearable sensor

Choi, J., Youn, J. H. & Haas, C., 2020, 40th International Conference on Information Systems, ICIS 2019. Association for Information Systems, (40th International Conference on Information Systems, ICIS 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

MiR-1253 exerts tumor-suppressive effects in medulloblastoma via inhibition of CDK6 and CD276 (B7-H3)

Kanchan, R. K., Perumal, N., Atri, P., Chirravuri Venkata, R., Thapa, I., Klinkebiel, D. L., Donson, A. M., Perry, D., Punsoni, M., Talmon, G. A., Coulter, D. W., Boue’, D. R., Snuderl, M., Nasser, M. W., Batra, S. K., Vibhakar, R. & Mahapatra, S., Jul 1 2020, In : Brain Pathology. 30, 4, p. 732-745 14 p.

Research output: Contribution to journalArticle

1 Scopus citations

MUCIN-4 (MUC4) is a novel tumor antigen in pancreatic cancer immunotherapy

Gautam, S. K., Kumar, S., Dam, V., Ghersi, D., Jain, M. & Batra, S. K., Feb 2020, In : Seminars in Immunology. 47, 101391.

Research output: Contribution to journalReview article

Multi-label classification and knowledge extraction from oncology-related content on online social networks

Hashemi, M. & Hall, M., 2020, (Accepted/In press) In : Artificial Intelligence Review.

Research output: Contribution to journalArticle

Multi-robot information driven path planning under communication constraints

Woosley, B., Dasgupta, P., Rogers, J. G. & Twigg, J., May 1 2020, In : Autonomous Robots. 44, 5, p. 721-737 17 p.

Research output: Contribution to journalArticle

On the performance of Matthews correlation coefficient (MCC) for imbalanced dataset

Zhu, Q., Aug 2020, In : Pattern Recognition Letters. 136, p. 71-80 10 p.

Research output: Contribution to journalArticle

On the planarity of validated complexes of model organisms in protein-protein interaction networks

Cooper, K., Cornelius, N., Gasper, W., Bhowmick, S. & Ali, H., 2020, Computational Science – ICCS 2020 - 20th International Conference, Proceedings. Krzhizhanovskaya, V. V., Závodszky, G., Lees, M. H., Sloot, P. M. A., Sloot, P. M. A., Sloot, P. M. A., Dongarra, J. J., Brissos, S. & Teixeira, J. (eds.). Springer, p. 652-666 15 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12137 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

Open Source in Development: Enabling Business and Services

Link, G. J. P., Kowal, J. & Qureshi, S., Jan 2 2020, In : Information Systems Management. 37, 1, p. 52-74 23 p.

Research output: Contribution to journalArticle

Outrage and anger in a global pandemic: flipping the script on healthcare

Qureshi, S., Jul 2 2020, In : Information Technology for Development. 26, 3, p. 445-457 13 p.

Research output: Contribution to journalEditorial

Open Access

Presence and structure-activity relationship of intrinsically disordered regions across mucins

Carmicheal, J., Atri, P., Sharma, S., Kumar, S., Chirravuri Venkata, R., Kulkarni, P., Salgia, R., Ghersi, D., Kaur, S. & Batra, S. K., Feb 1 2020, In : FASEB Journal. 34, 2, p. 1939-1957 19 p.

Research output: Contribution to journalArticle

Open Access

Programming Assignments: Identifying Red Flags

Morrison, B. B., Craig, M. & Quinn, B. A., May 12 2020, ACM Inroads, 11, 2, p. 6-7 2 p.

Research output: Contribution to specialist publicationArticle

Open Access

Reducing withdrawal and failure rates in introductory programming with subgoal labeled worked examples

Margulieux, L. E., Morrison, B. B. & Decker, A., Dec 1 2020, In : International Journal of STEM Education. 7, 1, 19.

Research output: Contribution to journalArticle

Open Access

Resolving the genetic paradox of invasions: Preadapted genomes and postintroduction hybridization of bigheaded carps in the Mississippi River Basin

Wang, J., Gaughan, S., Lamer, J. T., Deng, C., Hu, W., Wachholtz, M., Qin, S., Nie, H., Liao, X., Ling, Q., Li, W., Zhu, L., Bernatchez, L., Wang, C. & Lu, G., Feb 1 2020, In : Evolutionary Applications. 13, 2, p. 263-277 15 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations
Open Access

Tapestries of innovation: Structures of contemporary open source project engagements

Germonprez, M., Levy, M., Kendall, J. E. & Kendall, K. E., 2020, In : Journal of the Association for Information Systems. 21, 3, p. 615-663 49 p.

Research output: Contribution to journalArticle

The Changes in the Frog Gut Microbiome and Its Putative Oxygen-Related Phenotypes Accompanying the Development of Gastrointestinal Complexity and Dietary Shift

Zhang, M., Chen, H., Liu, L., Xu, L., Wang, X., Chang, L., Chang, Q., Lu, G., Jiang, J. & Zhu, L., Mar 3 2020, In : Frontiers in Microbiology. 11, 162.

Research output: Contribution to journalArticle

Open Access

The curious case of loops

Morrison, B. B., Margulieux, L. E. & Decker, A., Apr 2 2020, In : Computer Science Education. 30, 2, p. 127-154 28 p.

Research output: Contribution to journalArticle

The role of information search in creative problem solving

Harms, M., Reiter-Palmon, R. & Derrick, D. C., Aug 2020, In : Psychology of Aesthetics, Creativity, and the Arts. 14, 3, p. 367-380 14 p.

Research output: Contribution to journalArticle

3 Scopus citations

The Third Design Space: A postcolonial perspective on corporate engagement with open source software communities

Kendall, K. E., Kendall, J. E., Germonprez, M. & Mathiassen, L., Mar 1 2020, In : Information Systems Journal. 30, 2, p. 369-402 34 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Usability and cognitive load in the design of a personal health record

Clarke, M. A., Schuetzler, R. M., Windle, J. R., Pachunka, E. & Fruhling, A., Jun 2020, In : Health Policy and Technology. 9, 2, p. 218-224 7 p.

Research output: Contribution to journalArticle

Open Access
2019

A computer scientist teaches gen Ed math

Winter, V., Love, B., Friend, M. & Matthews, M., Dec 2019, Proceedings - 6th Annual Conference on Computational Science and Computational Intelligence, CSCI 2019. Institute of Electrical and Electronics Engineers Inc., p. 793-799 7 p. 9071071. (Proceedings - 6th Annual Conference on Computational Science and Computational Intelligence, CSCI 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Age-related changes in the gut microbiota of the Chinese giant salamander (Andrias davidianus)

Zhang, M., Gaughan, S., Chang, Q., Chen, H., Lu, G., Wang, X., Xu, L., Zhu, L. & Jiang, J., Jul 2019, In : MicrobiologyOpen. 8, 7, e00778.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

A Graph-Theoretic Approach for Identifying Bacterial Inter-correlations and Functional Pathways in Microbiome Data

Kim, S., Thapa, I. & Ali, H. H., Jan 21 2019, Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018. Schmidt, H., Griol, D., Wang, H., Baumbach, J., Zheng, H., Callejas, Z., Hu, X., Dickerson, J. & Zhang, L. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 405-411 7 p. 8621179. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Analyzing and predicting player performance in a quantum cryptography serious game

Abeyrathna, D., Vadla, S., Bommanapally, V., Subramaniam, M., Chundi, P. & Parakh, A., 2019, Games and Learning Alliance - 7th International Conference, GALA 2018, Proceedings. Söbke, H., Gentile, M. & Allegra, M. (eds.). Springer Verlag, p. 267-276 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11385 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

An approach towards automatic detection of toxoplasmosis using fundus images

Chakravarthy, A. D., Abeyrathna, D., Subramaniam, M., Chundi, P., Halim, M. S., Hasanreisoglu, M., Sepah, Y. J. & Nguyen, Q. D., Oct 2019, Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019. Institute of Electrical and Electronics Engineers Inc., p. 710-717 8 p. 8941984. (Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An approach towards designing problem networks in serious games

Parakh, A., Chundi, P. & Subramaniam, M., Aug 2019, IEEE Conference on Games 2019, CoG 2019. IEEE Computer Society, 8848055. (IEEE Conference on Computatonal Intelligence and Games, CIG; vol. 2019-August).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An Empirical Study of the Effect of Noise Models on Centrality Metrics

Sarkar, S., Karn, A., Mukherjee, A. & Bhowmick, S., 2019, Springer Proceedings in Complexity. Springer, p. 3-21 19 p. (Springer Proceedings in Complexity).

Research output: Chapter in Book/Report/Conference proceedingChapter

A novel graph theoretical approach for modeling microbiomes and inferring microbial ecological relationships

Kim, S., Thapa, I., Zhang, L. & Ali, H., Dec 20 2019, In : BMC genomics. 20, 945.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Are the gut microbial systems of giant pandas unstable?

Yao, R., Yang, Z., Zhang, Z., Hu, T., Chen, H., Huang, F., Gu, X., Yang, X., Lu, G. & Zhu, L., Sep 2019, In : Heliyon. 5, 9, e02480.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

A Shared-Memory Algorithm for Updating Single-Source Shortest Paths in Large Weighted Dynamic Networks

Srinivasan, S., Riazi, S., Norris, B., Das, S. K. & Bhowmick, S., Feb 8 2019, Proceedings - 25th IEEE International Conference on High Performance Computing, HiPC 2018. Institute of Electrical and Electronics Engineers Inc., p. 245-254 10 p. 8638105. (Proceedings - 25th IEEE International Conference on High Performance Computing, HiPC 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

A survey of game theoretic approaches for adversarial machine learning in cybersecurity tasks

Dasgupta, P. & Collins, J. B., Jul 5 2019, In : AI Magazine. 40, 2, p. 31-43 13 p.

Research output: Contribution to journalArticle

1 Scopus citations

A unified approach integrating human shared mental models with intelligent autonomous team formation for crisis management

Dasgupta, P. & Khazanchi, D., 2019, ISCRAM 2019 - Proceedings: 16th International Conference on Information Systems for Crisis Response and Management. Franco, Z., Gonzalez, J. J. & Canos, J. H. (eds.). Information Systems for Crisis Response and Management, ISCRAM, p. 1012-1020 9 p. (Proceedings of the International ISCRAM Conference; vol. 2019-May).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Barriers to integration of bioinformatics into undergraduate life sciences education: A national study of US life sciences faculty uncover significant barriers to integrating bioinformatics into undergraduate instruction

Williams, J. J., Drew, J. C., Galindo-Gonzalez, S., Robic, S., Dinsdale, E., Morgan, W. R., Triplett, E. W., Burnette, J. M., Donovan, S. S., Fowlks, E. R., Goodman, A. L., Grandgenett, N. F., Goller, C. C., Hauser, C., Jungck, J. R., Newman, J. D., Pearson, W. R., Ryder, E. F., Sierk, M. E., Smith, T. M. & 10 others, Tosado-Acevedo, R., Tapprich, W., Tobin, T. C., Toro-Martinez, A., Welch, L. R., Wilson, M. A., Ebenbach, D., McWilliams, M., Rosenwald, A. G. & Pauley, M. A., 2019, In : PloS one. 14, 11, e0224288.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations