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2020

Identification of Fusion Transcripts from Unaligned RNA-Seq Reads Using ChimeRScope

Vellichirammal, N. N., Albahrani, A., Li, Y. & Guda, C., Jan 1 2020, Methods in Molecular Biology. Humana Press Inc., p. 13-25 13 p. (Methods in Molecular Biology; vol. 2079).

Research output: Chapter in Book/Report/Conference proceedingChapter

2019

Animal models of cancer-associated cachexia

Shukla, S. K. & Singh, P. K., Apr 17 2019, Animal Models in Cancer Drug Discovery. Elsevier, p. 59-74 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Biochemical and cellular assays to assess the effects of acetylation on base excision repair enzymes

Roychoudhury, S., Pramanik, S., Harris, H. L. & Bhakat, K. K., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 191-206 16 p. (Methods in Molecular Biology; vol. 1983).

Research output: Chapter in Book/Report/Conference proceedingChapter

Evaluating the metabolic alterations in pancreatic cancer

Dasgupta, A., Shukla, S. K., Gunda, V., King, R. J. & Singh, P. K., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 221-228 8 p. (Methods in Molecular Biology; vol. 1882).

Research output: Chapter in Book/Report/Conference proceedingChapter

Molecular and physiological evaluation of pancreatic cancer-induced cachexia

Shukla, S. K., Dasgupta, A., Mulder, S. E. & Singh, P. K., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 321-333 13 p. (Methods in Molecular Biology; vol. 1882).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations
2018

Analysis of chromatin interactions mediated by specific architectural proteins in drosophila cells

Ando-Kuri, M., Rivera, I. S. M., Rowley, M. J. & Corces, V. G., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 239-256 18 p. (Methods in Molecular Biology; vol. 1766).

Research output: Chapter in Book/Report/Conference proceedingChapter

Carotid Disease

Suh, M. K. & Baxter, B. T., Jan 1 2018, Abernathy's Surgical Secrets: Seventh Edition. Elsevier Inc., p. 345-348 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Dissecting regulatory mechanisms using mouse fetal liver-derived erythroid cells

McIver, S. C., Hewitt, K. J., Gao, X., Mehta, C., Zhang, J. & Bresnick, E. H., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 67-89 23 p. (Methods in Molecular Biology; vol. 1698).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Evaluating the metabolic impact of hypoxia on pancreatic cancer cells

Murthy, D., Vernucci, E., Goode, G., Abrego, J. & Singh, P. K., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 81-93 13 p. (Methods in Molecular Biology; vol. 1742).

Research output: Chapter in Book/Report/Conference proceedingChapter

Evaluation of macrophage polarization in pancreatic cancer microenvironment under hypoxia

Attri, K. S., Mehla, K. & Singh, P. K., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 265-276 12 p. (Methods in Molecular Biology; vol. 1742).

Research output: Chapter in Book/Report/Conference proceedingChapter

6 Scopus citations

Hypoxia-induced metabolomic alterations in pancreatic cancer cells

Gunda, V., Kumar, S., Dasgupta, A. & Singh, P. K., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 95-105 11 p. (Methods in Molecular Biology; vol. 1742).

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations

Hypoxia-mediated in vivo tumor glucose uptake measurement and analysis

Shukla, S. K., Mulder, S. E. & Singh, P. K., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 107-113 7 p. (Methods in Molecular Biology; vol. 1742).

Research output: Chapter in Book/Report/Conference proceedingChapter

Induced pluripotent stem cells to generate skin tissue models

Kashpur, O., Smith, A., Mukhamedshina, N., Baskin, J., Shamis, Y., Hewitt, K., Gerami-Naini, B. & Garlick, J. A., Jan 1 2018, Skin Tissue Models. Elsevier Inc., p. 399-419 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Transcriptional profiling using RNA-seq to study hypoxia-mediated gene regulation

Shukla, S. K., King, R. J. & Singh, P. K., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 55-66 12 p. (Methods in Molecular Biology; vol. 1742).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations
2017

Lipid inflammatory mediators in cancer progression and therapy

Khadge, S., Sharp, J. G., McGuire, T. R., Thiele, G. M. & Talmadge, J. E., Jan 1 2017, Advances in Experimental Medicine and Biology. Springer New York LLC, p. 145-156 12 p. (Advances in Experimental Medicine and Biology; vol. 1036).

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations
2016

The Hematopoietic Stem and Progenitor Cell Cistrome: GATA Factor-Dependent cis-Regulatory Mechanisms

Hewitt, K. J., Johnson, K. D., Gao, X., Keles, S. & Bresnick, E. H., 2016, Hematopoiesis, 2016. Bresnick, E. H. (ed.). Academic Press Inc., p. 45-76 32 p. (Current Topics in Developmental Biology; vol. 118).

Research output: Chapter in Book/Report/Conference proceedingChapter

8 Scopus citations
2015

Small abdominal aortic aneurysm

Longo, G. M. & Baxter, B. T., Feb 24 2015, Clinical Scenarios in Vascular Surgery: Second Edition. Wolters Kluwer Health Adis (ESP)

Research output: Chapter in Book/Report/Conference proceedingChapter

Surgical Exposures for the Nerves of the Neck

Richards, A. T., Apr 23 2015, Pain, Treatment, Injury, Disease and Future Directions. Elsevier, Vol. 2. p. 201-213 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Translational Animal Models for Regenerative Medicine Research

Sharp, J. G., Jan 1 2015, Translational Regenerative Medicine. Elsevier Inc., p. 243-256 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2014

Generation of Conditional Knockout Mice

Sakamoto, K., Gurumurthy, C. B. & Wagner, K. U., 2014, Methods in Molecular Biology. Humana Press Inc., Vol. 1194. p. 21-35 15 p. (Methods in Molecular Biology; vol. 1194).

Research output: Chapter in Book/Report/Conference proceedingChapter

2013

Stem Cells, Induced Pluripotent Stem Cells, and Their Differentiation to Specified Lineage Fates

Huang, G. T. J., Zou, X. Y., Yan, X., Hewitt, K. J., Shamis, Y. & Garlick, J. A., Mar 26 2013, Stem Cells in Craniofacial Development and Regeneration. John Wiley and Sons, p. 204-222 19 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

The gene-gun approach for transfection and labeling of cells in brain slices

Dunaevsky, A., Sep 4 2013, Neural Development: Methods and Protocols. p. 111-118 8 p. (Methods in Molecular Biology; vol. 1018).

Research output: Chapter in Book/Report/Conference proceedingChapter

7 Scopus citations
2012

DGS (Ditag Genome Scanning) - A Restriction-Based Paired-End Sequencing Approach for Genome Structural Analysis

Chen, J., Kim, Y. C. & Wang, S. M., Jan 23 2012, Tag-Based Next Generation Sequencing. Wiley-VCH, p. 277-285 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Noncell autonomous reprogramming to a pluripotent state

Parameswaran, S., Balasubramanian, S. & Ahmad, I., Jan 1 2012, Nuclear Reprogramming and Stem Cells. Humana Press Inc., p. 141-153 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pathogenesis of aneurysms

Baxter, B. T. & Longo, G. M., Sep 11 2012, Greenfield's Surgery: Scientific Principles and Practice: Fifth Edition. Wolters Kluwer Health Adis (ESP), p. 1697-1706 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Retinal stem cells

Del Debbio, C. B., Parameswaran, S., Das, A. V. & Ahmad, I., Jan 1 2012, Neural Development and Stem Cells: Third Edition. Springer New York, p. 223-244 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Structural plasticity of dendrites

Dunaevsky, A. & Woolley, C. S., Mar 22 2012, Dendrites. Oxford University Press

Research output: Chapter in Book/Report/Conference proceedingChapter

2011

Regulation of hematopoiesis

Buckley, S. M. & Verfaillie, C., Dec 1 2011, Blood and Bone Marrow Pathology. Elsevier Ltd, p. 63-76 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations
2009

Carotid Disease

Worth, J. M. & Baxter, B. T., Jan 1 2009, Abernathy's Surgical Secrets. Elsevier Inc., p. 356-360 5 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pathogenesis of Aortic Aneurysms

Baxter, B. T. & MacTaggart, J., Dec 1 2009, Comprehensive Vascular and Endovascular Surgery. Elsevier, p. 465-472 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2008

Abdominal aortic aneurysms

Baxter, B. T. & Winterstein, B. A., Dec 1 2008, Surgery: Basic Science and Clinical Evidence: Second Edition. Springer New York, p. 1397-1411 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Mesenchymal Cells of the Lung

Rennard, S. I. & Graham Sharp, J., Jan 11 2008, Chronic Obstructive Pulmonary Disease. Blackwell Publishing Ltd, p. 308-316 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2007

How to create a recurrence after incisional hernia repair

Simons, M. P., De Vries Reilingh, T. S., Buyne, O. R., Bleichrodt, R. P., Frantzides, C. T., Laguna, L. E. & Carlson, M. A., Dec 1 2007, Recurrent Hernia: Prevention and Treatment. Springer Berlin Heidelberg, p. 163-178 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Mitoproteome: Human heart mitochondrial protein sequence database

Guda, P., Subramaniam, S. & Guda, C., Feb 5 2007, Cardiovascular Proteomics: Methods and Protocols. Vivanco, F. (ed.). p. 375-383 9 p. (Methods in Molecular Biology; vol. 357).

Research output: Chapter in Book/Report/Conference proceedingChapter

9 Scopus citations

Recent progress in the genetics of osteoporosis

Shen, H., Liu, Y. J., Xiao, P., Xiong, D. H. & Deng, H. W., Jan 1 2007, Current Topics in Human Genetics: Studies in Complex Diseases. World Scientific Publishing Co., p. 617-630 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Technical pitfalls favouring incisional hernia

Carlson, M. A. & Morales-Conde, S., Dec 1 2007, Recurrent Hernia: Prevention and Treatment. Springer Berlin Heidelberg, p. 135-149 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2005

Studying osteoporosis at the whole-genome level: Problems and prospects

Dvornyk, V., Xiao, P., Liu, Y. J., Shen, H. & Deng, H. W., Jan 1 2005, Current Topics in Osteoporosis. World Scientific Publishing Co., p. 464-498 35 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2004

Circulating Hematopoietic Stem Cell Transplantation

Kessinger, A. & Sharp, J. G., Sep 14 2004, Adult and Fetal. Elsevier Inc., Vol. 2. p. 685-693 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations
1985

Abdominal irradiation is a potent promoter of dimethylhydrazine induced colon tumors in rats

Sharp, J. G., Crouse, D. A. & Jackson, J. D., 1985, Proceedings of the American Association for Cancer Research. Vol. VOL. 26.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations

Altered NK susceptibility and expression of cell surface glycosylated molecules of metastatic lymphosarcoma cell lines

Joshi, S. S., Mathews, N. B., Brunson, K. W. & Sharp, J. G., 1985, Proceedings of the American Association for Cancer Research. Vol. VOL. 26.

Research output: Chapter in Book/Report/Conference proceedingChapter

1982

Effects of reduced food intake on morphometry and cell production in the small intestine of the rat

Lipscomb, H. L. & Sharp, J. G., 1982, Virchows Archiv Abteilung B Cell Pathology. 3 ed. Vol. 41. p. 285-292 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

17 Scopus citations
1981

Modulation of one of three murine bone marrow stromal cell lines to adipose cells by serum and insulin

Anderson, R. W., Mann, S. L., Crouse, D. A. & Sharp, J. G., 1981, Journal of Supramolecular and Cellular Biochemistry. 4 ed. Vol. 16. p. 377-384 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations
1980

Characterization of monolayer and organ cultures of cloned and enriched lymphohematopoietic stromal cell populations

Anderson, R. W. & Sharp, J. G., 1980, Journal of Supramolecular and Cellular Biochemistry. 1 ed. Vol. 14. p. 107-120 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations