Daniel C Ciobanu, PhD

  • 1376 Citations
  • 18 h-Index
20002019

Research output per year

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Research Output

  • 1376 Citations
  • 18 h-Index
  • 39 Article
  • 1 Chapter
  • 1 Review article
2019

A genome-wide association study for gestation length in swine

See, G. M., Trenhaile-Grannemann, M. D., Spangler, M. L., Ciobanu, D. C. & Mote, B. E., Oct 1 2019, In : Animal genetics. 50, 5, p. 539-542 4 p.

Research output: Contribution to journalArticle

Detection of atypical porcine pestivirus genome in newborn piglets affected by congenital tremor and high preweaning mortality

Sutton, K. M., Lahmers, K. K., Harris, S. P., Wijesena, H. R., Mote, B. E., Kachman, S. D., Borza, T. & Ciobanu, D. C., Oct 3 2019, In : Journal of animal science. 97, 10, p. 4093-4100 8 p.

Research output: Contribution to journalArticle

Open Access

Diet modulates cecum bacterial diversity and physiological phenotypes across the BXD mouse genetic reference population

Perez-Munoz, M. E., McKnite, A. M., Williams, E. G., Auwerx, J., Williams, R. W., Peterson, D. A. & Ciobanu, D. C., Oct 1 2019, In : PloS one. 14, 10, e0224100.

Research output: Contribution to journalArticle

Open Access

Evaluation of genotype quality parameters for SowPro90, a new genotyping array for swine

Wijesena, H. R., Rohrer, G. A., Nonneman, D. J., Keel, B. N., Petersen, J. L., Kachman, S. D. & Ciobanu, D. C., Aug 1 2019, In : Journal of animal science. 97, 8, p. 3262-3273 12 p.

Research output: Contribution to journalArticle

Open Access

Genome to phenome: Improving animal health, production, and well-being - A new USDA blueprint for animal genome research 2018-2027

Agricultural Animal Genomics Community, 2019, In : Frontiers in Genetics. 10, MAY, 327.

Research output: Contribution to journalReview article

Open Access
11 Scopus citations

Genome-wide association analysis for porcine reproductive and respiratory syndrome virus susceptibility traits in two genetic populations of pigs

Walker, L. R., Jobman, E. E., Sutton, K. M., Wittler, JN., Johnson, R. K. & Ciobanu, D. C., Aug 1 2019, In : Journal of animal science. 97, 8, p. 3253-3261 9 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations
2018

Synaptogyrin-2 influences replication of Porcine circovirus 2

Walker, L. R., Engle, T. B., Vu, H., Tosky, E. R., Nonneman, D. J., Smith, T. P. L., Borza, T., Burkey, T. E., Plastow, G. S., Kachman, S. D. & Ciobanu, D. C., Oct 2018, In : PLoS genetics. 14, 10, e1007750.

Research output: Contribution to journalArticle

4 Scopus citations
2017

A 16.7 kb deletion in Sipa1l3 is associated with juvenile cataract in mice

Walker, L. R., Tosky, E. R., Sutton, K. M., Griess, R., Abebe, M. D., Barnes, S. Y., Cunnigham, T., Kachman, S. D., Nielsen, M. K. & Ciobanu, D. C., Dec 1 2017, In : Mammalian Genome. 28, 11-12, p. 515-519 5 p.

Research output: Contribution to journalArticle

1 Scopus citations

Genomics Symposium: Using genomic approaches to uncover sources of variation in age at puberty and reproductive longevity in sows

Wijesena, H. R., Lents, C. A., Riethoven, J. J., Trenhaile-Grannemann, M. D., Thorson, J. F., Keel, B. N., Miller, P. S., Spangler, M. L., Kachman, S. D. & Ciobanu, D. C., Sep 2017, In : Journal of animal science. 95, 9, p. 4196-4205 10 p.

Research output: Contribution to journalArticle

5 Scopus citations
2016
4 Scopus citations

Joint mouse-human phenome-wide association to test gene function and disease risk

Wang, X., Pandey, A. K., Mulligan, M. K., Williams, E. G., Mozhui, K., Li, Z., Jovaisaite, V., Quarles, L. D., Xiao, Z., Huang, J., Capra, J. A., Chen, Z., Taylor, W. L., Bastarache, L., Niu, X., Pollard, K. S., Ciobanu, D. C., Reznik, A. O., Tishkov, A. V., Zhulin, I. B. & 6 others, Peng, J., Nelson, S. F., Denny, J. C., Auwerx, J., Lu, L. & Williams, R. W., Feb 2 2016, In : Nature communications. 7, 10464.

Research output: Contribution to journalArticle

61 Scopus citations

Long-term selection for litter size in swine results in shifts in allelic frequency in regions involved in reproductive processes

Trenhaile, M. D., Petersen, J. L., Kachman, S. D., Johnson, R. K. & Ciobanu, D. C., Oct 1 2016, In : Animal genetics. 47, 5, p. 534-542 9 p.

Research output: Contribution to journalArticle

6 Scopus citations
2015

An application of MeSH enrichment analysis in livestock

Morota, G., Peñagaricano, F., Petersen, J. L., Ciobanu, D. C., Tsuyuzaki, K. & Nikaido, I., Aug 1 2015, In : Animal genetics. 46, 4, p. 381-387 7 p.

Research output: Contribution to journalArticle

19 Scopus citations

Evaluation of reduced subsets of single nucleotide polymorphisms for the prediction of age at puberty in sows

Lucot, K. L., Spangler, M. L., Trenhaile, M. D., Kachman, S. D. & Ciobanu, D. C., Aug 1 2015, In : Animal genetics. 46, 4, p. 403-409 7 p.

Research output: Contribution to journalArticle

3 Scopus citations

Genome-wide analysis of TNF-alpha response in pigs challenged with porcine circovirus 2b

Kreikemeier, C. A., Engle, T. B., Lucot, K. L., Kachman, S. D., Burkey, T. E. & Ciobanu, D. C., Apr 1 2015, In : Animal genetics. 46, 2, p. 205-208 4 p.

Research output: Contribution to journalArticle

5 Scopus citations
2014

Beef cattle body temperature during climatic stress: A genome-wide association study

Howard, J. T., Kachman, S. D., Snelling, W. M., Pollak, E. J., Ciobanu, D. C., Kuehn, L. A. & Spangler, M. L., Sep 2014, In : International Journal of Biometeorology. 58, 7, p. 1665-1672 8 p.

Research output: Contribution to journalArticle

25 Scopus citations

Genomic analysis of the differential response to experimental infection with porcine circovirus 2b

McKnite, A. M., Bundy, J. W., Moural, T. W., Tart, J. K., Johnson, T. P., Jobman, E. E., Barnes, S. Y., Qiu, J. K., Peterson, D. A., Harris, S. P., Rothschild, M. F., Galeota, J. A., Johnson, R. K., Kachman, S. D. & Ciobanu, D. C., Apr 2014, In : Animal genetics. 45, 2, p. 205-214 10 p.

Research output: Contribution to journalArticle

5 Scopus citations

Variation in time and magnitude of immune response and viremia in experimental challenges with Porcine circovirus 2b

Engle, T. B., Jobman, E. E., Moural, T. W., McKnite, A. M., Bundy, J. W., Barnes, S. Y., Davis, E. H., Galeota, J. A., Burkey, T. E., Plastow, G. S., Kachman, S. D. & Ciobanu, D. C., 2014, In : BMC Veterinary Research. 10, 1, 286.

Research output: Contribution to journalArticle

8 Scopus citations
2013

Genome-wide prediction of age at puberty and reproductive longevity in sows

Tart, J. K., Johnson, R. K., Bundy, J. W., Ferdinand, N. N., McKnite, A. M., Wood, J. R., Miller, P. S., Rothschild, M. F., Spangler, M. L., Garrick, D. J., Kachman, S. D. & Ciobanu, D. C., Aug 2013, In : Animal genetics. 44, 4, p. 387-397 11 p.

Research output: Contribution to journalArticle

23 Scopus citations
2012

Murine gut microbiota is defined by host genetics and modulates variation of metabolic traits

McKnite, A. M., Perez-Munoz, M. E., Lu, L., Williams, E. G., Brewer, S., Andreux, P. A., Bastiaansen, J. W. M., Wang, X., Kachman, S. D., Auwerx, J., Williams, R. W., Benson, A. K., Peterson, D. A. & Ciobanu, D. C., Jun 18 2012, In : PloS one. 7, 6, e39191.

Research output: Contribution to journalArticle

120 Scopus citations
2011

Genetic modulation of horizontal cell number in the mouse retina

Whitney, I. E., Raven, M. A., Ciobanu, D. C., Poché, R. A., Ding, Q., Elshatory, Y., Gan, L., Williams, R. W. & Reese, B. E., Jun 7 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 23, p. 9697-9702 6 p.

Research output: Contribution to journalArticle

25 Scopus citations

Genetics of meat quality and carcass traits

Ciobanu, D. C., Lonergan, S. M. & Huff-Lonergan, E. J., Jan 21 2011, The Genetics of the Pig: Second Edition. CABI Publishing, p. 355-389 35 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

45 Scopus citations
2010

A gene-based SNP linkage map for pacific white shrimp, Litopenaeus vannamei

Du, Z. Q., Ciobanu, D. C., Onteru, S. K., Gorbach, D., Mileham, A. J., Jaramillo, G. & Rothschild, M. F., Jun 2010, In : Animal genetics. 41, 3, p. 286-294 9 p.

Research output: Contribution to journalArticle

50 Scopus citations

A major SNP resource for dissection of phenotypic and genetic variation in Pacific white shrimp (Litopenaeus vannamei)

Ciobanu, D. C., Bastiaansen, J. W. M., Magrin, J., Rocha, J. L., Jiang, D. H., Yu, N., Geiger, B., Deeb, N., Rocha, D., Gong, H., Kinghorn, B. P., Plastow, G. S., Van Der Steen, H. A. M. & Mileham, A. J., Feb 2010, In : Animal genetics. 41, 1, p. 39-47 9 p.

Research output: Contribution to journalArticle

33 Scopus citations

Detection, validation, and downstream analysis of allelic variation in gene expression

Ciobanu, D. C., Lu, L., Mozhui, K., Wang, X., Jagalur, M., Morris, J. A., Taylor, W. L., Dietz, K., Simon, P. & Williams, R. W., Jan 2010, In : Genetics. 184, 1, p. 119-128 10 p.

Research output: Contribution to journalArticle

46 Scopus citations

Quantitative genotyping to estimate genetic contributions to pooled samples and genetic merit of the contributing entities

Kinghorn, B. P., Bastiaansen, J. W. M., Ciobanu, D. C. & van der STEEN, H. A. M., Mar 2010, In : Acta Agriculturae Scandinavica A: Animal Sciences. 60, 1, p. 3-12 10 p.

Research output: Contribution to journalArticle

4 Scopus citations

Strain differences in stress responsivity are associated with divergent amygdala gene expression and glutamate-mediated neuronal excitability

Mozhui, K., Karlsson, R. M., Kash, T. L., Ihne, J., Norcross, M., Patel, S., Farrell, M. R., Hill, E. E., Graybeal, C., Martin, K. P., Camp, M., Fitzgerald, P. J., Ciobanu, D. C., Sprengel, R., Mishina, M., Wellman, C. L., Winder, D. G., Williams, R. W. & Holmes, A., Apr 14 2010, In : Journal of Neuroscience. 30, 15, p. 5357-5367 11 p.

Research output: Contribution to journalArticle

151 Scopus citations
2009

Multiple genes on chromosome 7 regulate dopaminergic amacrine cell number in the mouse retina

Whitney, I. E., Raven, M. A., Ciobanu, D. C., Williams, R. W. & Reese, B. E., 2009, In : Investigative Ophthalmology and Visual Science. 50, 5, p. 1996-2003 8 p.

Research output: Contribution to journalArticle

33 Scopus citations
2008

Dissection of a QTL hotspot on mouse distal chromosome 1 that modulates neurobehavioral phenotypes and gene expression

Mozhui, K., Ciobanu, D. C., Schikorski, T., Wang, X., Lu, L. & Williams, R. W., Nov 2008, In : PLoS genetics. 4, 11, e1000260.

Research output: Contribution to journalArticle

68 Scopus citations

Microarray analysis reveals distinctive signaling between the bed nucleus of the stria terminalis, nucleus accumbens, and dorsal striatum

Olsen, C. M., Huang, Y., Goodwin, S., Ciobanu, D. C., Lu, L., Sutter, T. R. & Winder, D. G., Feb 19 2008, In : Physiological genomics. 32, 3, p. 283-298 16 p.

Research output: Contribution to journalArticle

13 Scopus citations

Progress in reducing the pale, soft and exudative (PSE) problem in pork and poultry meat

Barbut, S., Sosnicki, A. A., Lonergan, S. M., Knapp, T., Ciobanu, D. C., Gatcliffe, L. J., Huff-Lonergan, E. & Wilson, E. W., May 2008, In : Meat Science. 79, 1, p. 46-63 18 p.

Research output: Contribution to journalArticle

203 Scopus citations
2007

SNP discovery, expression and association analysis for the SDHD gene in pigs

Guimaraes, S. E. F., Rothschild, M. F., Ciobanu, D., Stahl, C. H. & Lonergan, S. M., Jun 2007, In : Journal of Animal Breeding and Genetics. 124, 3, p. 139-143 5 p.

Research output: Contribution to journalArticle

4 Scopus citations

SNP discovery, expression and association analysis for the SDHD gene in pigs

Guimaraes, S. E. F., Rothschild, M. F., Ciobanu, D., Stahl, C. H. & Lonergan, S. M., Aug 2007, In : Journal of Animal Breeding and Genetics. 124, 4, p. 246-253 8 p.

Research output: Contribution to journalArticle

1 Scopus citations
2004

A form of albinism in cattle is caused by a tyrosinase frameshift mutation

Schmutz, S. M., Berryere, T. G., Ciobanu, D. C., Mileham, A. J., Schmidtz, B. H. & Fredholm, M., Jan 2004, In : Mammalian Genome. 15, 1, p. 62-67 6 p.

Research output: Contribution to journalArticle

52 Scopus citations

New alleles in calpastatin gene are associated with meat quality traits in pigs

Ciobanu, D. C., Bastiaansen, J. W. M., Lonergan, S. M., Thomsen, H., Dekkers, J. C. M., Plastow, G. S. & Rothschild, M. F., Oct 2004, In : Journal of animal science. 82, 10, p. 2829-2839 11 p.

Research output: Contribution to journalArticle

125 Scopus citations
2002

Rapid communication: Mapping of the Ca2+ ATPase of fast twitch 1 skeletal muscle sarcoplasmic reticulum (ATP2A1) gene to porcine chromosome 3

Ciobanu, D. C., Zhang, Y. & Rothschild, M. F., May 2002, In : Journal of animal science. 80, 5, p. 1386-1387 2 p.

Research output: Contribution to journalArticle

4 Scopus citations

Rapid communication: Mapping of the beta Tropomyosin (TPM2) gene to pig chromosome

Sherwood, J., Ciobanu, D. & Rothschild, M. F., May 2002, In : Journal of animal science. 80, 5, p. 1379-1380 2 p.

Research output: Contribution to journalArticle

2 Scopus citations

Rapid communication: Physical and linkage mapping of the porcine calcitonin (CALC) gene

Neil, J. E., Vleck, S. E., Helm, J. M., Ciobanu, D. C. & Rothschild, M. F., Jun 2002, In : Journal of animal science. 80, 6, p. 1700-1701 2 p.

Research output: Contribution to journalArticle

2001

Evidence for new alleles in the protein kinase adenosine monophosphateactivated γ3-subunit gene associated with low glycogen content in pig skeletal muscle and improved meat quality

Ciobanu, D., Bastiaansen, J., Malek, M., Helm, J., Woollard, J., Plastow, G. & Rothschild, M. F., 2001, In : Genetics. 159, 3, p. 1151-1162 12 p.

Research output: Contribution to journalArticle

189 Scopus citations

Genetic variation in two conserved local Romanian pig breeds using type 1 DNA markers

Ciobanu, D. C., Day, A. E., Nagy, A., Wales, R., Rothschild, M. F. & Plastow, G. S., 2001, In : Genetics Selection Evolution. 33, 4, p. 417-432 16 p.

Research output: Contribution to journalArticle

Open Access
25 Scopus citations
2000

Rapid communication: Porcine vitamin D-25-hydroxylase maps to chromosome 5.

Ciobanu, D. C., Gill, R. K., Rothschild, M. F. & Bell, N. H., Dec 2000, In : Journal of animal science. 78, 12, p. 3193-3194 2 p.

Research output: Contribution to journalArticle

2 Scopus citations