• 3005 Citations
  • 24 h-Index
19972020

Research output per year

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Research Output

1997
29 Scopus citations
1998
66 Scopus citations
1999

A study of fluctuating asymmetry in hybrids of dwarf and normal lake whitefish ecotypes (Coregonus clupeaformis) from different glacial races

Lu, G. & Bernatchez, L., Dec 1999, In : Heredity. 83, 6, p. 742-747 6 p.

Research output: Contribution to journalArticle

22 Scopus citations
233 Scopus citations

Integrating molecular genetics and ecology in studies of adaptive radiation: Whitefish, Coregonus sp., as a case study

Bernatchez, L., Chouinard, A. & Lu, G., 1999, In : Biological Journal of the Linnean Society. 68, 1-2, p. 173-194 22 p.

Research output: Contribution to journalArticle

124 Scopus citations
2001
126 Scopus citations
2003

Colonic spirochetosis of colony-raised rhesus macaques associated with Brachyspira and Helicobacter

Duhamel, G. E., Stryker, C. J., Lu, G., Wong, V. J. & Tarara, R. P., Feb 2003, In : Anaerobe. 9, 1, p. 45-55 11 p.

Research output: Contribution to journalArticle

12 Scopus citations

DePIE: Designing primers for protein interaction experiments

Lu, G., Hallett, M., Pollock, S. & Thomas, D., Jul 1 2003, In : Nucleic acids research. 31, 13, p. 3755-3757 3 p.

Research output: Contribution to journalArticle

8 Scopus citations
2004

Ileocolitis associated with Anaerobiospirillum in cats

De Cock, H. E. V., Marks, S. L., Stacy, B. A., Zabka, T. S., Burkitt, J., Lu, G., Steffen, D. J. & Duhamel, G. E., Jun 2004, In : Journal of clinical microbiology. 42, 6, p. 2752-2758 7 p.

Research output: Contribution to journalArticle

28 Scopus citations

The Hera database and its use in the characterization of endoplasmic reticulum proteins

Scott, M., Lu, G., Hallett, M. & Thomas, D. Y., Apr 12 2004, In : Bioinformatics. 20, 6, p. 937-944 8 p.

Research output: Contribution to journalArticle

28 Scopus citations

Vector NTI, a balanced all-in-one sequence analysis suite.

Lu, G. & Moriyama, E. N., Dec 2004, In : Briefings in bioinformatics. 5, 4, p. 378-388 11 p.

Research output: Contribution to journalArticle

Open Access
218 Scopus citations
2006

AffyMiner: Mining differentially expressed genes and biological knowledge in GeneChip microarray data

Lu, G., Nguyen, T. V., Xia, Y. & Fromm, M., Dec 12 2006, In : BMC bioinformatics. 7, SUPPL.4, S26.

Research output: Contribution to journalArticle

4 Scopus citations

GenomeBlast: A web tool for small genome comparison

Lu, G., Jiang, L., Helikar, R. M. K., Rowley, T. W., Zhang, L., Chen, X. & Moriyama, E. N., 2006, In : BMC bioinformatics. 7, SUPPL.4, S18.

Research output: Contribution to journalArticle

17 Scopus citations

GenomeBlast: A Web tool for small genome comparison

Lu, G., Jiang, L., Kotalik, R. M., Rowley, T. W., Zhang, L., Chen, X. & Moriyama, E. N., 2006, First International Multi- Symposiums on Computer and Computational Sciences, IMSCCS'06. p. 136-141 6 p. 1636030. (First International Multi- Symposiums on Computer and Computational Sciences, IMSCCS'06; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

22 Scopus citations

The Arabidopsis homolog of trithorax, ATX1, binds phosphatidylinositol 5-phosphate, and the two regulate a common set of target genes

Alvarez-Venegas, R., Sadder, M., Hlavacka, A., Baluška, F., Xia, Y., Lu, G., Firsov, A., Sarath, G., Moriyama, H., Dubrovsky, J. G. & Avramova, Z., Apr 11 2006, In : Proceedings of the National Academy of Sciences of the United States of America. 103, 15, p. 6049-6054 6 p.

Research output: Contribution to journalArticle

109 Scopus citations
2007

AffyMiner - A tool for significant gene mining in affymetrix GeneChip microarray data

Lu, G., Nguyen, T., Xia, Y., Wang, Z. & Fromm, M., 2007, Proceedings of the 40th Annual Hawaii International Conference on System Sciences 2007, HICSS'07. 4076628. (Proceedings of the Annual Hawaii International Conference on System Sciences).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A practical approach to phylogenomics: The phylogeny of ray-finned fish (Actinopterygii) as a case study

Li, C., Ortí, G., Zhang, G. & Lu, G., 2007, In : BMC Evolutionary Biology. 7, 44.

Research output: Contribution to journalArticle

260 Scopus citations

FluGenome: A web tool for genotyping influenza A virus

Lu, G., Rowley, T., Garten, R. & Donis, R. O., Jul 2007, In : Nucleic acids research. 35, SUPPL.2, p. W275-W279

Research output: Contribution to journalArticle

64 Scopus citations

Influenza A virus informatics: Genotype-centered database and genotype annotation

Lu, G., Buyyani, K., Goty, N., Donis, R. & Chen, Z., 2007, Proceedings - 2nd International Multi-Symposiums on Computer and Computational Sciences, IMSCCS'07. p. 76-83 8 p. 4392583. (Proceedings - 2nd International Multi-Symposiums on Computer and Computational Sciences, IMSCCS'07).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Modeling miRNA data

Lopez, S., Lu, G. & Chen, Z., 2007, Proceedings of the 2007 ACM Symposium on Applied Computing. Association for Computing Machinery, p. 158-162 5 p. (Proceedings of the ACM Symposium on Applied Computing).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2008

An improved string composition method for sequence comparison

Lu, G., Zhang, S. & Fang, X., May 28 2008, In : BMC bioinformatics. 9, SUPPL. 6, S15.

Research output: Contribution to journalArticle

32 Scopus citations

Complete mitochondrial genome of the grass carp (Ctenopharyngodon idella, Teleostei): Insight into its phylogenic position within Cyprinidae

Wang, C., Chen, Q., Lu, G., Xu, J., Yang, Q. & Li, S., Nov 15 2008, In : Gene. 424, 1-2, p. 96-101 6 p.

Research output: Contribution to journalArticle

127 Scopus citations
2 Scopus citations

Optimal data partitioning and a test case for ray-finned fishes (Actinopterygii) based on ten nuclear loci

Li, C., Lu, G. & Ortí, G., Aug 2008, In : Systematic Biology. 57, 4, p. 519-539 21 p.

Research output: Contribution to journalArticle

160 Scopus citations

The highly similar Arabidopsis homologs of trithorax ATX1 and ATX2 encode proteins with divergent biochemical functions

Saleh, A., Alvarez-Venegas, R., Yilmaz, M., Oahn-Le, Hou, G., Sadder, M., Al-Abdallat, A., Xia, Y., Lu, G., Ladunga, I. & Avramovaa, Z., Mar 2008, In : Plant Cell. 20, 3, p. 568-579 12 p.

Research output: Contribution to journalArticle

129 Scopus citations
2009

7TMRmine: A Web server for hierarchical mining of 7TMR proteins

Lu, G., Wang, Z., Jones, A. M. & Moriyama, E. N., Jun 19 2009, In : BMC genomics. 10, 275.

Research output: Contribution to journalArticle

12 Scopus citations

A comparison of complete mitochondrial genomes of silver carp hypophthalmichthys molitrix and bighead carp hypophthalmichthys nobilis: Implications for their taxonomic relationship and phylogeny

Li, S. F., Xu, J. W., Yang, Q. L., Wang, C. H., Chen, Q., Chapman, D. C. & Lu, G., May 2009, In : Journal of Fish Biology. 74, 8, p. 1787-1803 17 p.

Research output: Contribution to journalArticle

21 Scopus citations

Analysis of genetic variation in grass carp (Ctenopharyngodon idellus) from native and colonized regions using ISSR markers

Chen, Q., Wang, C. H., Lu, G., Song, X., Xu, J. W., Yang, Q. L. & Li, S. F., Nov 2009, In : Biochemical Systematics and Ecology. 37, 5, p. 549-555 7 p.

Research output: Contribution to journalArticle

17 Scopus citations

Gene expression profiling of tolerant barley in response to diuraphis noxia (Hemiptera: Aphididae) feeding

Gutsche, A., Heng-Moss, T., Sarath, G., Twigg, P., Xia, Y., Lu, G. & Mornhinweg, D., Apr 2009, In : Bulletin of Entomological Research. 99, 2, p. 163-173 11 p.

Research output: Contribution to journalArticle

47 Scopus citations

Integrating decision tree and hidden markov model (hmm) for subtype prediction of human influenza a virus

Attaluri, P. K., Chen, Z., Weerakoon, A. M. & Lu, G., 2009, Cutting-Edge Research Topics on Multiple Criteria Decision Making: 20th International Conference, MCDM 2009, Chengdu/Jiuzhaigou, Proceedings. p. 52-58 7 p. (Communications in Computer and Information Science; vol. 35).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

The Arabidopsis chromatin modifier ATX1, the myotubularin-like AtMTM and the response to drought.

Ding, Y., Lapko, H., Ndamukong, I., Xia, Y., Al-Abdallat, A., Lalithambika, S., Sadder, M., Saleh, A., Fromm, M., Riethoven, J. J., Lu, G. & Avramova, Z., Nov 2009, In : Plant signaling & behavior. 4, 11, p. 1049-1058 10 p.

Research output: Contribution to journalArticle

Open Access
32 Scopus citations
2010

Applying neural networks to classify influenza virus antigenic types and hosts

Attaluri, P. K., Chen, Z. & Lu, G., 2010, 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010. p. 279-284 6 p. 5510726. (2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

9 Scopus citations

Cloning, characterization and expression of the pepsinogen C from the golden mandarin fish Siniperca scherzeri (Teleostei: Perciformes)

Deng, Y., Zhao, J., Lu, G., Wu, X. & Tao, Y., 2010, In : Fisheries Science. 76, 5, p. 819-826 8 p.

Research output: Contribution to journalArticle

4 Scopus citations

Genetic diversity and variation of mitochondrial DNA in native and introduced bighead carp

Li, S. F., Yang, Q. L., Xu, JIA. WEI., Wang, C. H., Chapman, D. C. & Lu, G., 2010, In : Transactions of the American Fisheries Society. 139, 4, p. 937-946 10 p.

Research output: Contribution to journalArticle

9 Scopus citations

On the origin of species: Insights from the ecological genomics of lake whitefish

Bernatchez, L., Renaut, S., Whiteley, A. R., Derome, N., Jeukens, J., Landry, L., Lu, G., Nolte, A. W., Østbye, K., Rogers, S. M. & St-Cyr, J., Jun 12 2010, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 365, 1547, p. 1783-1800 18 p.

Research output: Contribution to journalArticle

170 Scopus citations

Sequence comparison using multi-order Markov chains

Fang, X., Lu, G. & Zhang, S., 2010, 2010 4th International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2010. 5515258. (2010 4th International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2010).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2011

Evolutionary dynamics of influenza A nucleoprotein (NP) lineages revealed by large-scale sequence analyses

Xu, J., Christman, M. C., Donis, R. O. & Lu, G., Dec 2011, In : Infection, Genetics and Evolution. 11, 8, p. 2125-2132 8 p.

Research output: Contribution to journalArticle

15 Scopus citations

Evolution of influenza viral neuraminidase (NA) revealed by large-scale sequence analysis.

Xu, J. & Lu, G., May 2011, In : Influenza and other respiratory viruses. 5 Suppl 1, p. 405-408 4 p.

Research output: Contribution to journalArticle

2 Scopus citations

Large-scale sequence analysis of influenza A hemagglutinin (HA): insights into a unified system for lineage assignment.

Rickert, J., Xu, J., Christman, M. & Lu, G., May 2011, In : Influenza and other respiratory viruses. 5 Suppl 1, p. 410-413 4 p.

Research output: Contribution to journalArticle

Pandemic (H1N1) 2009 virus revisited: An evolutionary retrospective

Christman, M. C., Kedwaii, A., Xu, J., Donis, R. O. & Lu, G., Jul 2011, In : Infection, Genetics and Evolution. 11, 5, p. 803-811 9 p.

Research output: Contribution to journalReview article

44 Scopus citations

Population genetic structure and evolutionary history of grass carp Ctenopharyngodon idella in the Yangtze River, China

Zhao, J., Cao, Y., Li, S., Li, J., Deng, Y. & Lu, G., Jan 2011, In : Environmental Biology of Fishes. 90, 1, p. 85-93 9 p.

Research output: Contribution to journalArticle

8 Scopus citations

Significant genetic differentiation between native and introduced silver carp (Hypophthalmichthys molitrix) inferred from mtDNA analysis

Li, S. F., Xu, J. W., Yang, Q. L., Wang, C. H., Chapman, D. C. & Lu, G., Dec 2011, In : Environmental Biology of Fishes. 92, 4, p. 503-511 9 p.

Research output: Contribution to journalArticle

6 Scopus citations
2012

Complete mitogenome sequence of black carp (Mylopharyngodon piceus) and its use for molecular phylogeny of leuciscine fishes

Chenghui, W., Wang, J., Yang, J., Lu, G., Song, X., Chen, Q., Xu, J., Yang, Q. & Li, S., May 2012, In : Molecular Biology Reports. 39, 5, p. 6337-6342 6 p.

Research output: Contribution to journalArticle

11 Scopus citations
3 Scopus citations

Evolutionary history and phylodynamics of influenza A and B neuraminidase (NA) genes inferred from large-scale sequence analyses

Xu, J., Davis, C. T., Christman, M. C., Rivailler, P., Zhong, H., Donis, R. O. & Lu, G., Jul 11 2012, In : PloS one. 7, 7, e38665.

Research output: Contribution to journalArticle

24 Scopus citations

Microsatellite genetic diversity and differentiation of native and introduced grass carp populations in three continents

Chen, Q., Wang, C., Lu, G., Zhao, J., Chapman, D. C., Zsigmond, J. & Li, S., Jun 2012, In : Genetica. 140, 4-6, p. 115-123 9 p.

Research output: Contribution to journalArticle

10 Scopus citations

PhyloMarker–-A Tool for Mining Phylogenetic Markers through Genome Comparison: Application of the Mouse Lemur (Genus Microcebus) Phylogeny

Lei, R., Rowley, T. W., Zhu, L., Bailey, C. A., Engberg, S. E., Wood, M. L., Christman, M. C., Perry, G. H., Louis, E. E. & Lu, G., Jan 1 2012, In : Evolutionary Bioinformatics. 8

Research output: Contribution to journalReview article

Open Access
7 Scopus citations
2013

Dynamics of Influenza Virus and Human Host Interactions During Infection and Replication Cycle

Madrahimov, A., Helikar, T., Kowal, B., Lu, G. & Rogers, J., Jun 2013, In : Bulletin of Mathematical Biology. 75, 6, p. 988-1011 24 p.

Research output: Contribution to journalArticle

15 Scopus citations

The Tree of Life and a New Classification of Bony Fishes

Betancur-R, R., Broughton, R. E., Wiley, E. O., Carpenter, K., López, J. A., Li, C., Holcroft, N. I., Arcila, D., Sanciangco, M., Cureton, J. C., Zhang, F., Buser, T., Campbell, M. A., Ballesteros, J. A., Roa-Varon, A., Willis, S., Borden, W. C., Rowley, T., Reneau, P. C., Hough, D. J. & 4 others, Lu, G., Grande, T., Arratia, G. & Ortí, G., 2013, In : PLoS Currents. APR 2013, ecurrents.tol.53ba26640df0ccaee75bb165c8c26288.

Research output: Contribution to journalArticle

463 Scopus citations