• 3005 Citations
  • 24 h-Index
19972020

Research output per year

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Research Output

7TMRmine: A Web server for hierarchical mining of 7TMR proteins

Lu, G., Wang, Z., Jones, A. M. & Moriyama, E. N., Jun 19 2009, In : BMC genomics. 10, 275.

Research output: Contribution to journalArticle

12 Scopus citations

A comparison of complete mitochondrial genomes of silver carp hypophthalmichthys molitrix and bighead carp hypophthalmichthys nobilis: Implications for their taxonomic relationship and phylogeny

Li, S. F., Xu, J. W., Yang, Q. L., Wang, C. H., Chen, Q., Chapman, D. C. & Lu, G., May 2009, In : Journal of Fish Biology. 74, 8, p. 1787-1803 17 p.

Research output: Contribution to journalArticle

21 Scopus citations

Adaptive evolution to a high purine and fat diet of carnivorans revealed by gut microbiomes and host genomes

Zhu, L., Wu, Q., Deng, C., Zhang, M., Zhang, C., Chen, H., Lu, G. & Wei, F., May 2018, In : Environmental microbiology. 20, 5, p. 1711-1722 12 p.

Research output: Contribution to journalArticle

8 Scopus citations

AffyMiner: Mining differentially expressed genes and biological knowledge in GeneChip microarray data

Lu, G., Nguyen, T. V., Xia, Y. & Fromm, M., Dec 12 2006, In : BMC bioinformatics. 7, SUPPL.4, S26.

Research output: Contribution to journalArticle

4 Scopus citations

AffyMiner - A tool for significant gene mining in affymetrix GeneChip microarray data

Lu, G., Nguyen, T., Xia, Y., Wang, Z. & Fromm, M., 2007, Proceedings of the 40th Annual Hawaii International Conference on System Sciences 2007, HICSS'07. 4076628. (Proceedings of the Annual Hawaii International Conference on System Sciences).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Age-related changes in the gut microbiota of the Chinese giant salamander (Andrias davidianus)

Zhang, M., Gaughan, S., Chang, Q., Chen, H., Lu, G., Wang, X., Xu, L., Zhu, L. & Jiang, J., Jul 2019, In : MicrobiologyOpen. 8, 7, e00778.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Analysis of genetic variation in grass carp (Ctenopharyngodon idellus) from native and colonized regions using ISSR markers

Chen, Q., Wang, C. H., Lu, G., Song, X., Xu, J. W., Yang, Q. L. & Li, S. F., Nov 2009, In : Biochemical Systematics and Ecology. 37, 5, p. 549-555 7 p.

Research output: Contribution to journalArticle

17 Scopus citations

Analysis of the skin transcriptome in two Oujiang color varieties of common carp

Wang, C., Wachholtz, M., Wang, J., Liao, X. & Lu, G., Mar 6 2014, In : PloS one. 9, 3, e90074.

Research output: Contribution to journalArticle

25 Scopus citations

An improved string composition method for sequence comparison

Lu, G., Zhang, S. & Fang, X., May 28 2008, In : BMC bioinformatics. 9, SUPPL. 6, S15.

Research output: Contribution to journalArticle

32 Scopus citations

An integrated and comprehensive transcriptome reveals immune-related genes and signal pathways in topmouth culter (Culter alburnus)

Lei, S., Chen, X., Wang, J., Zhou, L., Zhang, Y., Zhang, G., Lu, G. & Wang, C., May 1 2017, In : Aquaculture Research. 48, 5, p. 2231-2242 12 p.

Research output: Contribution to journalArticle

2 Scopus citations

Applying neural networks to classify influenza virus antigenic types and hosts

Attaluri, P. K., Chen, Z. & Lu, G., 2010, 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010. p. 279-284 6 p. 5510726. (2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2010).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

9 Scopus citations

A practical approach to phylogenomics: The phylogeny of ray-finned fish (Actinopterygii) as a case study

Li, C., Ortí, G., Zhang, G. & Lu, G., 2007, In : BMC Evolutionary Biology. 7, 44.

Research output: Contribution to journalArticle

260 Scopus citations

Are the gut microbial systems of giant pandas unstable?

Yao, R., Yang, Z., Zhang, Z., Hu, T., Chen, H., Huang, F., Gu, X., Yang, X., Lu, G. & Zhu, L., Sep 2019, In : Heliyon. 5, 9, e02480.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

A study of fluctuating asymmetry in hybrids of dwarf and normal lake whitefish ecotypes (Coregonus clupeaformis) from different glacial races

Lu, G. & Bernatchez, L., Dec 1999, In : Heredity. 83, 6, p. 742-747 6 p.

Research output: Contribution to journalArticle

22 Scopus citations

A systems biology approach for modeling microbiomes using split graphs

Kim, S., Thapa, I., Lu, G., Zhu, L. & Ali, H. H., Dec 15 2017, Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017. Yoo, I., Zheng, J. H., Gong, Y., Hu, X. T., Shyu, C-R., Bromberg, Y., Gao, J. & Korkin, D. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 2062-2068 7 p. (Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017; vol. 2017-January).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Changes in the community structure of the symbiotic microbes of wild amphibians from the eastern edge of the Tibetan Plateau

Xu, L. L., Chen, H., Zhang, M., Zhu, W., Chang, Q., Lu, G., Chen, Y., Jiang, J. & Zhu, L., Apr 1 2020, In : MicrobiologyOpen. 9, 4, e1004.

Research output: Contribution to journalArticle

Open Access

Characterization of pikeperch (Sander lucioperca) transcriptome and development of SSR markers

Han, X., Ling, Q., Li, C., Wang, G., Xu, Z. & Lu, G., Jun 1 2016, In : Biochemical Systematics and Ecology. 66, p. 188-195 8 p.

Research output: Contribution to journalArticle

9 Scopus citations

Cloning, characterization and expression of the pepsinogen C from the golden mandarin fish Siniperca scherzeri (Teleostei: Perciformes)

Deng, Y., Zhao, J., Lu, G., Wu, X. & Tao, Y., 2010, In : Fisheries Science. 76, 5, p. 819-826 8 p.

Research output: Contribution to journalArticle

4 Scopus citations

Colonic spirochetosis of colony-raised rhesus macaques associated with Brachyspira and Helicobacter

Duhamel, G. E., Stryker, C. J., Lu, G., Wong, V. J. & Tarara, R. P., Feb 2003, In : Anaerobe. 9, 1, p. 45-55 11 p.

Research output: Contribution to journalArticle

12 Scopus citations

Comparative skin transcriptome of two Oujiang color common carp (Cyprinus carpio var. color) varieties

Du, J., Chen, X., Wang, J., Chen, H., Yue, W., Lu, G. & Wang, C., Feb 15 2019, In : Fish Physiology and Biochemistry. 45, 1, p. 177-185 9 p.

Research output: Contribution to journalArticle

1 Scopus citations

Complete genome sequences of Pseudomonas fluorescens bacteriophages isolated from freshwater samples in Omaha, Nebraska

Lu, G., Luhr, J., Stoecklein, A., Warner, P. & Tapprich, W., 2017, In : Genome Announcements. 5, 12, e01501-16.

Research output: Contribution to journalArticle

4 Scopus citations

Complete mitochondrial genome of the grass carp (Ctenopharyngodon idella, Teleostei): Insight into its phylogenic position within Cyprinidae

Wang, C., Chen, Q., Lu, G., Xu, J., Yang, Q. & Li, S., Nov 15 2008, In : Gene. 424, 1-2, p. 96-101 6 p.

Research output: Contribution to journalArticle

127 Scopus citations

Complete mitochondrial genomes of three mitten crabs, Eriocheir sinensis, E. Hepuensis, and E. Japonica

Wang, J., Huang, L., Cheng, Q., Lu, G. & Wang, C. H., 2016, In : Mitochondrial DNA. 27, 2, p. 1175-1176 2 p.

Research output: Contribution to journalArticle

8 Scopus citations

Complete mitogenome sequence of black carp (Mylopharyngodon piceus) and its use for molecular phylogeny of leuciscine fishes

Chenghui, W., Wang, J., Yang, J., Lu, G., Song, X., Chen, Q., Xu, J., Yang, Q. & Li, S., May 2012, In : Molecular Biology Reports. 39, 5, p. 6337-6342 6 p.

Research output: Contribution to journalArticle

11 Scopus citations
3 Scopus citations
126 Scopus citations
233 Scopus citations

DePIE: Designing primers for protein interaction experiments

Lu, G., Hallett, M., Pollock, S. & Thomas, D., Jul 1 2003, In : Nucleic acids research. 31, 13, p. 3755-3757 3 p.

Research output: Contribution to journalArticle

8 Scopus citations

Differential gene expression in chronic wasting disease-positive white-tailed deer (Odocoileus virginianus)

Trone-Launer, E. K., Wang, J., Lu, G., Mateus-Pinilla, N. E., Zick, P. R., Lamer, J. T., Shelton, P. A. & Jacques, C. N., Nov 1 2019, In : Ecology and Evolution. 9, 22, p. 12600-12612 13 p.

Research output: Contribution to journalArticle

Open Access

Dynamics of Influenza Virus and Human Host Interactions During Infection and Replication Cycle

Madrahimov, A., Helikar, T., Kowal, B., Lu, G. & Rogers, J., Jun 2013, In : Bulletin of Mathematical Biology. 75, 6, p. 988-1011 24 p.

Research output: Contribution to journalArticle

15 Scopus citations

Endangered Père David’s deer genome provides insights into population recovering

Zhu, L., Deng, C., Zhao, X., Ding, J., Huang, H., Zhu, S., Wang, Z., Qin, S., Ding, Y., Lu, G. & Yang, Z., Dec 2018, In : Evolutionary Applications. 11, 10, p. 2040-2053 14 p.

Research output: Contribution to journalArticle

5 Scopus citations
Open Access
1 Scopus citations

Evolution and genetics of bighead and silver carps: Native population conservation versus invasive species control

Lu, G., Wang, C., Zhao, J., Liao, X., Wang, J., Luo, M., Zhu, L., Bernatzhez, L. & Li, S., Jul 1 2020, In : Evolutionary Applications. 13, 6, p. 1351-1362 12 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Evolutionary dynamics of influenza A nucleoprotein (NP) lineages revealed by large-scale sequence analyses

Xu, J., Christman, M. C., Donis, R. O. & Lu, G., Dec 2011, In : Infection, Genetics and Evolution. 11, 8, p. 2125-2132 8 p.

Research output: Contribution to journalArticle

15 Scopus citations

Evolutionary history and phylodynamics of influenza A and B neuraminidase (NA) genes inferred from large-scale sequence analyses

Xu, J., Davis, C. T., Christman, M. C., Rivailler, P., Zhong, H., Donis, R. O. & Lu, G., Jul 11 2012, In : PloS one. 7, 7, e38665.

Research output: Contribution to journalArticle

24 Scopus citations

Evolutionary relationship of three mitten crabs (Eriocheir sp)revealed by mitogenome and 5S ribosomal DNA analysis

Chen, X., Wang, J., Huang, L., Yue, W., Zou, J., Yuan, C., Lu, G. & Wang, C., Nov 2017, In : Aquaculture and Fisheries. 2, 6, p. 256-261 6 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Evolution of influenza viral neuraminidase (NA) revealed by large-scale sequence analysis.

Xu, J. & Lu, G., May 2011, In : Influenza and other respiratory viruses. 5 Suppl 1, p. 405-408 4 p.

Research output: Contribution to journalArticle

2 Scopus citations
66 Scopus citations

FluGenome: A web tool for genotyping influenza A virus

Lu, G., Rowley, T., Garten, R. & Donis, R. O., Jul 2007, In : Nucleic acids research. 35, SUPPL.2, p. W275-W279

Research output: Contribution to journalArticle

64 Scopus citations

Gene expression profiling of tolerant barley in response to diuraphis noxia (Hemiptera: Aphididae) feeding

Gutsche, A., Heng-Moss, T., Sarath, G., Twigg, P., Xia, Y., Lu, G. & Mornhinweg, D., Apr 2009, In : Bulletin of Entomological Research. 99, 2, p. 163-173 11 p.

Research output: Contribution to journalArticle

47 Scopus citations

Genetic diversity and variation of mitochondrial DNA in native and introduced bighead carp

Li, S. F., Yang, Q. L., Xu, JIA. WEI., Wang, C. H., Chapman, D. C. & Lu, G., 2010, In : Transactions of the American Fisheries Society. 139, 4, p. 937-946 10 p.

Research output: Contribution to journalArticle

9 Scopus citations

Genetic diversity in oxytocin ligands and receptors in New World monkeys

Ren, D., Lu, G., Moriyama, H., Mustoe, A. C., Harrison, E. B. & French, J. A., May 4 2015, In : PloS one. 10, 5, e0125775.

Research output: Contribution to journalArticle

33 Scopus citations

GenomeBlast: A web tool for small genome comparison

Lu, G., Jiang, L., Helikar, R. M. K., Rowley, T. W., Zhang, L., Chen, X. & Moriyama, E. N., 2006, In : BMC bioinformatics. 7, SUPPL.4, S18.

Research output: Contribution to journalArticle

17 Scopus citations

GenomeBlast: A Web tool for small genome comparison

Lu, G., Jiang, L., Kotalik, R. M., Rowley, T. W., Zhang, L., Chen, X. & Moriyama, E. N., 2006, First International Multi- Symposiums on Computer and Computational Sciences, IMSCCS'06. p. 136-141 6 p. 1636030. (First International Multi- Symposiums on Computer and Computational Sciences, IMSCCS'06; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Genomes of major fishes in world fisheries and aquaculture: Status, application and perspective

Lu, G. & Luo, M., 2020, (Accepted/In press) In : Aquaculture and Fisheries.

Research output: Contribution to journalReview article

Open Access

Habitat use and population structure of the shoal chub (Macrhybopsis hyostoma) in the upper Mississippi River basin

Gaughan, S., Steffensen, K. & Lu, G., Jun 15 2019, In : Environmental Biology of Fishes. 102, 6, p. 901-914 14 p.

Research output: Contribution to journalArticle

2 Scopus citations

Ileocolitis associated with Anaerobiospirillum in cats

De Cock, H. E. V., Marks, S. L., Stacy, B. A., Zabka, T. S., Burkitt, J., Lu, G., Steffen, D. J. & Duhamel, G. E., Jun 2004, In : Journal of clinical microbiology. 42, 6, p. 2752-2758 7 p.

Research output: Contribution to journalArticle

28 Scopus citations

Influenza A virus informatics: Genotype-centered database and genotype annotation

Lu, G., Buyyani, K., Goty, N., Donis, R. & Chen, Z., 2007, Proceedings - 2nd International Multi-Symposiums on Computer and Computational Sciences, IMSCCS'07. p. 76-83 8 p. 4392583. (Proceedings - 2nd International Multi-Symposiums on Computer and Computational Sciences, IMSCCS'07).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Insect and plant-derived miRNAs in greenbug (Schizaphis graminum) and yellow sugarcane aphid (Sipha flava) revealed by deep sequencing

Wang, H., Zhang, C., Dou, Y., Yu, B., Liu, Y., Heng-Moss, T. M., Lu, G., Wachholtz, M., Bradshaw, J. D., Twigg, P., Scully, E., Palmer, N. & Sarath, G., Jan 30 2017, In : Gene. 599, p. 68-77 10 p.

Research output: Contribution to journalArticle

8 Scopus citations