Jim A Rogers, PhD

  • 1173 Citations
  • 16 h-Index
1991 …2020

Research output per year

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Research Output

  • 1173 Citations
  • 16 h-Index
  • 24 Article
  • 2 Review article
Article

A cell simulator platform: The cell collective

Helikar, T., Kowal, B. & Rogers, J. A., May 2013, In : Clinical Pharmacology and Therapeutics. 93, 5, p. 393-395 3 p.

Research output: Contribution to journalArticle

15 Scopus citations

A Comprehensive, Multi-Scale Dynamical Model of ErbB Receptor Signal Transduction in Human Mammary Epithelial Cells

Helikar, T., Kochi, N., Kowal, B., Dimri, M., Naramura, M., Raja, S. M., Band, V., Band, H. & Rogers, J. A., Apr 18 2013, In : PloS one. 8, 4, e61757.

Research output: Contribution to journalArticle

27 Scopus citations

Activation of STAT3 by the c-Fes protein-tyrosine kinase

Nelson, K. L., Rogers, J. A., Bowman, T. L., Jove, R. & Smithgall, T. E., Mar 20 1998, In : Journal of Biological Chemistry. 273, 12, p. 7072-7077 6 p.

Research output: Contribution to journalArticle

67 Scopus citations

A mean paradox

Konvalina, J., Heidel, J., Rogers, J. & Thomassen, C., Feb 2006, In : American Mathematical Monthly. 113, 2, p. 166-169 4 p.

Research output: Contribution to journalArticle

Open Access
9 Scopus citations

Autophosphorylation of the Fes tyrosine kinase. Evidence for an intermolecular mechanism involving two kinase domain tyrosine residues

Rogers, J. A., Read, R. D., Li, J., Peters, K. L. & Smithgall, T. E., 1996, In : Journal of Biological Chemistry. 271, 29, p. 17519-17525 7 p.

Research output: Contribution to journalArticle

64 Scopus citations

Bio-Logic Builder: A Non-Technical Tool for Building Dynamical, Qualitative Models

Helikar, T., Kowal, B., Madrahimov, A., Shrestha, M., Pedersen, J., Limbu, K., Thapa, I., Rowley, T., Satalkar, R., Kochi, N., Konvalina, J. & Rogers, J. A., Oct 17 2012, In : PloS one. 7, 10, e46417.

Research output: Contribution to journalArticle

9 Scopus citations

Boolean network topologies and the determinative power of nodes

Wacker, B. W., Velcsov, M. T. & Rogers, J. A., Feb 20 2020, In : Journal of Complex Networks. 8, 1, cnaa003.

Research output: Contribution to journalArticle

39 Scopus citations

Combinatorial fractal geometry with a biological application

Konvalina, J., Konfisakhar, I., Heidel, J. & Rogers, J., Jun 2006, In : Fractals. 14, 2, p. 133-142 10 p.

Research output: Contribution to journalArticle

1 Scopus citations

Defective control of Epstein-Barr virus-infected B cell growth in patients with X-linked lymphoproliferative disease

Yasuda, N., Lai, P. K., Rogers, J. & Purtlo, D. T., 1991, In : Clinical and Experimental Immunology. 83, 1, p. 10-16 7 p.

Research output: Contribution to journalArticle

20 Scopus citations

Dynamics of Influenza Virus and Human Host Interactions During Infection and Replication Cycle

Madrahimov, A., Helikar, T., Kowal, B., Lu, G. & Rogers, J., Jun 2013, In : Bulletin of Mathematical Biology. 75, 6, p. 988-1011 24 p.

Research output: Contribution to journalArticle

15 Scopus citations

Emergent decision-making in biological signal transduction networks

Helikar, T., Konvalina, J., Heidel, J. & Rogers, J. A., Feb 12 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 6, p. 1913-1918 6 p.

Research output: Contribution to journalArticle

119 Scopus citations

Finding cycles in synchronous Boolean networks with applications to biochemical systems

Heidel, J., Maloney, J., Farrow, C. & Rogers, J. A., Mar 2003, In : International Journal of Bifurcation and Chaos in Applied Sciences and Engineering. 13, 3, p. 535-552 18 p.

Research output: Contribution to journalArticle

144 Scopus citations

Integrating Interactive Computational Modeling in Biology Curricula

Helikar, T., Cutucache, C. E., Dahlquist, L. M., Herek, T. A., Larson, J. J. & Rogers, J. A., Mar 19 2015, In : PLoS computational biology. 11, 3, e1004131.

Research output: Contribution to journalArticle

10 Scopus citations

In vitro analysis of a mammalian retinal progenitor that gives rise to neurons and glia

Ahmad, I., Dooley, C. M., Thoreson, W. B., Rogers, J. A. & Afiat, S., Jun 12 1999, In : Brain Research. 831, 1-2, p. 1-10 10 p.

Research output: Contribution to journalArticle

107 Scopus citations

Regulation of c-Fes tyrosine kinase and biological activities by N- terminal coiled-coil oligomerization domains

Cheng, H., Rogers, J. A., Dunham, N. A. & Smithgall, T. E., Dec 1999, In : Molecular and cellular biology. 19, 12, p. 8335-8343 9 p.

Research output: Contribution to journalArticle

Open Access
37 Scopus citations

Scalar equations for synchronous Boolean networks with biological applications

Farrow, C., Heidel, J., Maloney, J. & Rogers, J., Mar 2004, In : IEEE Transactions on Neural Networks. 15, 2, p. 348-354 7 p.

Research output: Contribution to journalArticle

108 Scopus citations

Sensitivity analysis of biological Boolean networks using information fusion based on nonadditive set functions

Kochi, N., Helikar, T., Allen, L., Rogers, J. A., Wang, Z. & Matache, M. T., Sep 5 2014, In : BMC systems biology. 8, 1, 92.

Research output: Contribution to journalArticle

4 Scopus citations

Src homology 2 domain substitution modulates the kinase and transforming activities of the Fes protein-tyrosine kinase

Rogers, J. A., Cheng, H. Y. & Smithgall, T. E., 2000, In : Cell Growth and Differentiation. 11, 11, p. 581-592 12 p.

Research output: Contribution to journalArticle

16 Scopus citations

Survival and differentiation of cultured retinal progenitors transplanted in the subretinal space of the rat

Chacko, D. M., Rogers, J. A., Turner, J. E. & Ahmad, I., Feb 24 2000, In : Biochemical and Biophysical Research Communications. 268, 3, p. 842-846 5 p.

Research output: Contribution to journalArticle

148 Scopus citations

The Cell Collective: Toward an open and collaborative approach to systems biology

Helikar, T., Kowal, B., McClenathan, S., Bruckner, M., Rowley, T., Madrahimov, A., Wicks, B., Shrestha, M., Limbu, K. & Rogers, J. A., Aug 7 2012, In : BMC systems biology. 6, 96.

Research output: Contribution to journalArticle

74 Scopus citations

The role of NeuroD as a differentiation factor in the mammalian retina

Ahmad, I., Acharya, H. R., Rogers, J. A., Shibata, A., Smithgall, T. E. & Dooley, C. M., 1998, In : Journal of Molecular Neuroscience. 11, 2, p. 165-178 14 p.

Research output: Contribution to journalArticle

37 Scopus citations
17 Scopus citations
Review article

Boolean modeling of biochemical networks

Helikar, T., Kochi, N., Konvalina, J. & Rogers, J. A., 2011, In : Open Bioinformatics Journal. 5, p. 16-25 10 p.

Research output: Contribution to journalReview article

25 Scopus citations

The c-Fes family of protein-tyrosine kinases

Smithgall, T. E., Rogers, J. A., Peters, K. L., Li, J., Briggs, S. D., Lionberger, J. M., Cheng, H., Shibata, A., Scholtz, B., Schreiner, S. & Dunham, N., 1998, In : Critical Reviews in Oncogenesis. 9, 1, p. 43-62 20 p.

Research output: Contribution to journalReview article

61 Scopus citations