• 2926 Citations
  • 28 h-Index
1979 …2020

Research output per year

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Article
2020

Differentiation of francisella tularensis subspecies and subtypes

Larson, M. A., Sayood, K., Bartling, A. M., Meyer, J. R., Starr, C., Baldwin, J. & Dempsey, M. P., Jan 1 2020, In : Journal of clinical microbiology. 58, 4, e01495-19.

Research output: Contribution to journalArticle

Open Access
2019

MIMOSA: Algorithms for Microbial Profiling

Nalbantoglu, O. U. & Sayood, K., Nov 1 2019, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 16, 6, p. 2023-2034 12 p., 8350295.

Research output: Contribution to journalArticle

Online EEG seizure detection and localization

Mansouri, A., Singh, S. P. & Sayood, K., Sep 1 2019, In : Algorithms. 12, 9, 176.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations
2016

Reclassification of Wolbachia persica as Francisella persica comb. nov. and emended description of the family Francisellaceae

Larson, M. A., Nalbantoglu, U., Sayood, K., Zentz, E. B., Cer, R. Z., Iwen, P. C., Francesconi, S. C., Bishop-Lilly, K. A., Mokashi, V. P., Sjöstedt, A. & Hinrichs, S. H., Mar 2016, In : International Journal of Systematic and Evolutionary Microbiology. 66, 3, p. 1200-1205 6 p.

Research output: Contribution to journalArticle

15 Scopus citations
2015

Francisella tularensis subtype A.II genomic plasticity in comparison with subtype A.I

Larson, M. A., Nalbantoglu, U., Sayood, K., Zentz, E. B., Bartling, A. M., Francesconi, S. C., Fey, P. D., Dempsey, M. P. & Hinrichs, S. H., Apr 28 2015, In : PloS one. 10, 4, e0124906.

Research output: Contribution to journalArticle

1 Scopus citations
2014

Metagenomic analysis of the microbial community in kefir grains

Nalbantoglu, U., Cakar, A., Dogan, H., Abaci, N., Ustek, D., Sayood, K. & Can, H., Aug 1 2014, In : Food Microbiology. 41, p. 42-51 10 p.

Research output: Contribution to journalArticle

55 Scopus citations
2012

Characterization of the Acinetobacter baumannii growth phase-dependent and serum responsive transcriptomes

Jacobs, A. C., Sayood, K., Olmsted, S. B., Blanchard, C. E., Hinrichs, S., Russell, D. & Dunman, P. M., Apr 1 2012, In : FEMS Immunology and Medical Microbiology. 64, 3, p. 403-412 10 p.

Research output: Contribution to journalArticle

30 Scopus citations

Identification of two small regulatory RNAs linked to virulence in Brucella abortus 2308

Caswell, C. C., Gaines, J. M., Ciborowski, P., Smith, D., Borchers, C. H., Roux, C. M., Sayood, K., Dunman, P. M. & Roop, R. M., Jul 1 2012, In : Molecular Microbiology. 85, 2, p. 345-360 16 p.

Research output: Contribution to journalArticle

51 Scopus citations
2011

RAIphy: Phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles

Nalbantoglu, O. U., Way, S. F., Hinrichs, S. H. & Sayood, K., Jan 31 2011, In : BMC bioinformatics. 12, 41.

Research output: Contribution to journalArticle

49 Scopus citations

Small molecule inhibitors of staphylococcus aureus RnpA alter cellular mRNA turnover, exhibit antimicrobial activity, and attenuate pathogenesis

Olson, P. D., Kuechenmeister, L. J., Anderson, K. L., Daily, S., Beenken, K. E., Roux, C. M., Reniere, M. L., Lewis, T. L., Weiss, W. J., Pulse, M., Nguyen, P., Simecka, J. W., Morrison, J. M., Sayood, K., Asojo, O. A., Smeltzer, M. S., Skaar, E. P. & Dunman, P. M., Feb 1 2011, In : PLoS pathogens. 7, 2, e1001287.

Research output: Contribution to journalArticle

41 Scopus citations
2010

Acinetobacter baumannii increases tolerance to antibiotics in response to monovalent cations

Hood, M. I., Jacobs, A. C., Sayood, K., Dunman, P. M. & Skaar, E. P., Mar 1 2010, In : Antimicrobial Agents and Chemotherapy. 54, 3, p. 1029-1041 13 p.

Research output: Contribution to journalArticle

49 Scopus citations

A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences

Russell, D. J., Way, S. F., Benson, A. K. & Sayood, K., Dec 17 2010, In : BMC bioinformatics. 11, 601.

Research output: Contribution to journalArticle

29 Scopus citations

Inactivation of phospholipase D diminishes Acinetobacter baumannii pathogenesis

Jacobs, A. C., Hood, I., Boyd, K. L., Olson, P. D., Morrison, J. M., Carson, S., Sayood, K., Iwen, P. C., Skaar, E. P. & Dunman, P. M., May 1 2010, In : Infection and immunity. 78, 5, p. 1952-1962 11 p.

Research output: Contribution to journalArticle

120 Scopus citations

Large direct repeats flank genomic rearrangements between a new clinical isolate of Francisella tularensis subsp. tularensis A1 and schu S4

Nalbantoglu, U., Sayood, K., Dempsey, M. P., Iwen, P. C., Francesconi, S. C., Barabote, R. D., Xie, G., Brettin, T. S., Hinrichs, S. H. & Fey, P. D., Feb 3 2010, In : PloS one. 5, 2, e9007.

Research output: Contribution to journalArticle

13 Scopus citations
2009

Joint source channel coding using arithmetic codes

Bi, D., Hoffman, M. W. & Sayood, K., Nov 12 2009, In : Synthesis Lectures on Communications. 4, p. 1-77 77 p.

Research output: Contribution to journalArticle

2008

Grammar-based distance in progressive multiple sequence alignment

Russell, D. J., Otu, H. H. & Sayood, K., Jul 10 2008, In : BMC bioinformatics. 9, 306.

Research output: Contribution to journalArticle

32 Scopus citations

Hyperthermophilic Aquifex aeolicus initiates primer synthesis on a limited set of trinucleotides comprised of cytosines and guanines

Larson, M. A., Bressani, R., Sayood, K., Corn, J. E., Berger, J. M., Griep, M. A. & Hinrichs, S. H., Oct 1 2008, In : Nucleic acids research. 36, 16, p. 5260-5269 10 p.

Research output: Contribution to journalArticle

10 Scopus citations

The average mutual information profile as a genomic signature

Bauer, M., Schuster, S. M. & Sayood, K., Jan 25 2008, In : BMC bioinformatics. 9, 48.

Research output: Contribution to journalArticle

31 Scopus citations
2007

A CMOS imager with focal plane compression using predictive coding

León-Salas, W. D., Balkir, S., Sayood, K., Schemm, N. & Hoffman, M. W., Nov 1 2007, In : IEEE Journal of Solid-State Circuits. 42, 11, p. 2555-2572 18 p., 4362102.

Research output: Contribution to journalArticle

49 Scopus citations

A low-complexity circuit for on-sensor concurrent A/D conversion and compression

Leon-Salas, W. D., Balkir, S., Sayood, K., Schemm, N. & Hoffman, M. W., Sep 1 2007, In : IEEE Sensors Journal. 7, 9, p. 1317-1324 8 p.

Research output: Contribution to journalArticle

5 Scopus citations

Lossless hyperspectral-image compression using context-based conditional average

Wang, H., Babacan, S. D. & Sayood, K., Dec 1 2007, In : IEEE Transactions on Geoscience and Remote Sensing. 45, 12, p. 4187-4193 7 p.

Research output: Contribution to journalArticle

56 Scopus citations

Lossless video sequence compression using adaptive prediction

Li, Y. & Sayood, K., Apr 1 2007, In : IEEE Transactions on Image Processing. 16, 4, p. 997-1007 11 p.

Research output: Contribution to journalArticle

31 Scopus citations
2006

An Analog-to-Digital Converter With Golomb-Rice Output Codes

Leon-Salas, W. D., Balkir, S., Sayood, K. & Hoffman, M. W., Apr 6 2006, In : IEEE Transactions on Circuits and Systems II: Express Briefs. 53, 4, p. 278-282 5 p.

Research output: Contribution to journalArticle

11 Scopus citations

Learning programming using MATLAB

Sayood, K., Dec 27 2006, In : Synthesis Lectures on Electrical Engineering. 3, p. 1-88 88 p.

Research output: Contribution to journalArticle

2005

A successively refinable lossless image-coding algorithm

Avcibaş, I., Memon, N., Sankur, B. & Sayood, K., Mar 1 2005, In : IEEE Transactions on Communications. 53, 3, p. 445-452 8 p.

Research output: Contribution to journalArticle

14 Scopus citations
2004

Utilization of the relative complexity measure to construct a phylogenetic tree for fungi

Bastola, D. R., Otu, H. H., Doukas, S. E., Sayood, K., Hinrichs, S. H. & Iwen, P. C., Feb 2004, In : Mycological Research. 108, 2, p. 117-125 9 p.

Research output: Contribution to journalArticle

20 Scopus citations
2003

A divide-and-conquer approach to fragment assembly

Otu, H. H. & Sayood, K., Jan 1 2003, In : Bioinformatics. 19, 1, p. 22-29 8 p.

Research output: Contribution to journalArticle

17 Scopus citations

A new sequence distance measure for phylogenetic tree construction

Otu, H. H. & Sayood, K., Nov 1 2003, In : Bioinformatics. 19, 16, p. 2122-2130 9 p.

Research output: Contribution to journalArticle

261 Scopus citations
2002

A progressive lossless/near-lossless image compression algorithm

Avcibaş, I., Memon, N., Sankur, B. & Sayood, K., Oct 2002, In : IEEE Signal Processing Letters. 9, 10, p. 312-314 3 p.

Research output: Contribution to journalArticle

20 Scopus citations

Statistical evaluation of image quality measures

Avcibaş, I., Sankur, B. & Sayood, K., Apr 2002, In : Journal of Electronic Imaging. 11, 2, p. 206-223 18 p.

Research output: Contribution to journalArticle

453 Scopus citations
2001

Joint source/channel coding using arithmetic codes

Pettijohn, B. D., Hoffman, M. W. & Sayood, K., May 1 2001, In : IEEE Transactions on Communications. 49, 5, p. 826-835 10 p.

Research output: Contribution to journalArticle

58 Scopus citations

Joint source channel coding using arithmetic codes and trellis coded modulation

Demiroğlu, C., Hoffman, M. W. & Sayood, K., Jan 1 2001, In : Data Compression Conference Proceedings. p. 302-311 10 p.

Research output: Contribution to journalArticle

15 Scopus citations

Lossless and near-lossless image compression with successive refinement

Avcibaş, İ., Memon, N., Sankur, B. & Sayood, K., Jan 1 2001, In : Proceedings of SPIE - The International Society for Optical Engineering. 4310, p. 41-52 12 p.

Research output: Contribution to journalArticle

3 Scopus citations
2000

Joint source/channel coding for variable length codes

Sayood, K., Otu, H. H. & Demir, N., Dec 3 2000, In : IEEE Transactions on Communications. 48, 5, p. 787-794 8 p.

Research output: Contribution to journalArticle

71 Scopus citations
1999

A joint source/channel coder with block constraints

Otu, H. H. & Sayood, K., Dec 1 1999, In : IEEE Transactions on Communications. 47, 11, p. 1615-1618 4 p.

Research output: Contribution to journalArticle

9 Scopus citations
1996

Lossless compression of video sequences

Memon, N. D. & Sayood, K., Dec 1 1996, In : IEEE Transactions on Communications. 44, 9, p. 1340-1345 6 p.

Research output: Contribution to journalArticle

45 Scopus citations

Lossless compression of video sequences

Memon, N. D. & Sayood, K., Apr 1 1996, In : IEEE Transactions on Communications. 44, 4, p. 527-528 2 p.

Research output: Contribution to journalArticle

10 Scopus citations

Scan predictive vector quantization of multispectral images

Memon, N. D. & Sayood, K., Dec 1 1996, In : IEEE Transactions on Image Processing. 5, 2, p. 330-337 8 p.

Research output: Contribution to journalArticle

1995

Lossless compression of RGB color images

Memon, N. D. & Sayood, K., Jun 1 1995, In : Optical Engineering. 34, 6, p. 1711-1717 7 p.

Research output: Contribution to journalArticle

13 Scopus citations

Lossless Image Compression with a Codebook of Block Scans

Memon, N. D., Sayood, K. & Magliveras, S. S., Jan 1995, In : IEEE Journal on Selected Areas in Communications. 13, 1, p. 24-30 7 p.

Research output: Contribution to journalArticle

11 Scopus citations
1994

A Constrained Joint Source/Channel Coder Design

Sayood, K., Liu, F. & Gibson, J. D., Dec 1994, In : IEEE Journal on Selected Areas in Communications. 12, 9, p. 1584-1593 10 p.

Research output: Contribution to journalArticle

47 Scopus citations

Compression of Color-Mapped Images

Hadenfeldt, A. C. & Sayood, K., May 1994, In : IEEE Transactions on Geoscience and Remote Sensing. 32, 3, p. 534-541 8 p.

Research output: Contribution to journalArticle

18 Scopus citations

Lossless Compression of Multispectral Image Data

Memon, N. D., Sayood, K. & Magliveras, S. S., Mar 1994, In : IEEE Transactions on Geoscience and Remote Sensing. 32, 2, p. 282-289 8 p.

Research output: Contribution to journalArticle

76 Scopus citations

Simple high-quality lossy image coding scheme

Bi, S. & Sayood, K., Jan 1 1994, In : Journal of Electronic Imaging. 3, 1, p. 81-91 11 p.

Research output: Contribution to journalArticle

1993

Simple method for enhancing the performance of lossy plus lossless image compression schemes

Memon, N. D., Sayood, K. & Magliveras, S. S., Jan 1 1993, In : Journal of Electronic Imaging. 2, 3, p. 245-252 8 p.

Research output: Contribution to journalArticle

5 Scopus citations
1992

A Differential Lossless Image Compression Scheme

Sayood, K., Jan 1992, In : IEEE Transactions on Signal Processing. 40, 1, p. 236-241 6 p.

Research output: Contribution to journalArticle

14 Scopus citations

A Robust Coding Scheme for Packet Video

Chen, Y. C., Sayood, K. & Nelson, D. J., Sep 1992, In : IEEE Transactions on Communications. 40, 9, p. 1491-1501 11 p.

Research output: Contribution to journalArticle

11 Scopus citations

Recursively Indexed Quantization of Memoryless Sources

Sayood, K. & Na, S., Sep 1992, In : IEEE Transactions on Information Theory. 38, 5, p. 1602-1609 8 p.

Research output: Contribution to journalArticle

9 Scopus citations
1991

Use of Residual Redundancy in the Design of Joint Source/Channel Coders

Sayood, K. & Borkenhagen, J. C., Jun 1991, In : IEEE Transactions on Communications. 39, 6, p. 838-846 9 p.

Research output: Contribution to journalArticle

181 Scopus citations