• 2936 Citations
  • 29 h-Index
1983 …2019

Research output per year

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Research Output

2019

A synthetic cdo/csad taurine pathway in the green unicellular alga Chlamydomonas reinhardtii

Tevatia, R., Payne, S., Allen, J., White, D., Clemente, T. E., Cerutti, H., Demirel, Y. & Blum, P., Jun 2019, In : Algal Research. 40, 101491.

Research output: Contribution to journalArticle

1 Scopus citations

Comparative kinetic modeling of growth and molecular hydrogen overproduction by engineered strains of Thermotoga maritima

Singh, R., Tevatia, R., White, D., Demirel, Y. & Blum, P., Mar 15 2019, In : International Journal of Hydrogen Energy. 44, 14, p. 7125-7136 12 p.

Research output: Contribution to journalArticle

9 Scopus citations

Evidence of an Epigenetics System in Archaea

Blum, P. & Payne, S., Jul 1 2019, In : Epigenetics Insights. 12

Research output: Contribution to journalComment/debate

Open Access
1 Scopus citations

Methylation deficiency of chromatin proteins is a non-mutational and epigenetic-like trait in evolved lines of the archaeon Sulfolobus solfataricus

Johnson, T., Payne, S., Grove, R., McCarthy, S., Oeltjen, E., Mach, C., Adamec, J., Wilson, M. A., Cott, K. V. & Blum, P., May 10 2019, In : Journal of Biological Chemistry. 294, 19, p. 7821-7832 12 p.

Research output: Contribution to journalArticle

3 Scopus citations
2018

Enhancement of Metallosphaera sedula Bioleaching by Targeted Recombination and Adaptive Laboratory Evolution

McCarthy, S., Ai, C. & Blum, P., Jan 1 2018, Advances in Applied Microbiology. Gadd, G. M. & Sariaslani, S. (eds.). Academic Press Inc., p. 135-165 31 p. (Advances in Applied Microbiology; vol. 104).

Research output: Chapter in Book/Report/Conference proceedingChapter

5 Scopus citations

Nonmutational mechanism of inheritance in the Archaeon Sulfolobus solfataricus

Payne, S., McCarthy, S., Johnson, T., North, E. & Blum, P., Nov 27 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 48, p. 12271-12276 6 p.

Research output: Contribution to journalArticle

4 Scopus citations

Secretion and fusion of biogeochemically active archaeal membrane vesicles

Johnson, T. B., Mach, C., Grove, R., Kelly, R., Van Cott, K. & Blum, P., Nov 2018, In : Geobiology. 16, 6, p. 659-673 15 p.

Research output: Contribution to journalArticle

1 Scopus citations

Uncoupling fermentative synthesis of molecular hydrogen from biomass formation in Thermotoga maritima

Singh, R., White, D., Demirel, Y., Kelly, R., Noll, K. & Blum, P., Sep 1 2018, In : Applied and environmental microbiology. 84, 17, e00998-18.

Research output: Contribution to journalArticle

17 Scopus citations
2017

Contribution of pentose catabolism to molecular hydrogen formation by targeted disruption of arabinose isomerase (araA) in the hyperthermophilic bacterium Thermotoga maritima

White, D., Singh, R., Rudrappa, D., Mateo, J., Kramer, L., Freese, L. & Blum, P., 2017, In : Applied and environmental microbiology. 83, 4, e02631-16.

Research output: Contribution to journalArticle

7 Scopus citations

Evolution of copper arsenate resistance for enhanced enargite bioleaching using the extreme thermoacidophile Metallosphaera sedula

Ai, C., McCarthy, S., Liang, Y., Rudrappa, D., Qiu, G. & Blum, P., Dec 1 2017, In : Journal of Industrial Microbiology and Biotechnology. 44, 12, p. 1613-1625 13 p.

Research output: Contribution to journalArticle

12 Scopus citations
4 Scopus citations

Repurposed bacterial toxins for human therapeutics

Pavlik, B. J., Van Cott, K. E. & Blum, P. H., 2017, In : Current Topics in Peptide and Protein Research. 18, p. 1-15 15 p.

Research output: Contribution to journalReview article

2016

Expanding the limits of thermoacidophily in the archaeon Sulfolobus solfataricus by adaptive evolution

McCarthy, S., Johnson, T., Pavlik, B. J., Payne, S., Schackwitz, W., Martin, J., Lipzen, A., Keffeler, E. & Blum, P., 2016, In : Applied and environmental microbiology. 82, 3, p. 857-867 11 p.

Research output: Contribution to journalArticle

20 Scopus citations

Increased acid resistance of the archaeon, Metallosphaera sedula by adaptive laboratory evolution

Ai, C., McCarthy, S., Eckrich, V., Rudrappa, D., Qiu, G. & Blum, P., Oct 1 2016, In : Journal of Industrial Microbiology and Biotechnology. 43, 10, p. 1455-1465 11 p.

Research output: Contribution to journalArticle

17 Scopus citations

Retargeting the Clostridium botulinum C2 toxin to the neuronal cytosol

Pavlik, B. J., Hruska, E. J., Van Cott, K. E. & Blum, P. H., Mar 30 2016, In : Scientific reports. 6, 23707.

Research output: Contribution to journalArticle

2 Scopus citations
2015

Complete genome sequence of an evolved Thermotoga maritima isolate

Singh, R., Gradnigo, J., White, D., Lipzen, A., Martin, J., Schackwitz, W., Moriyama, E. & Blum, P., 2015, In : Genome Announcements. 3, 3, e00557-15.

Research output: Contribution to journalArticle

5 Scopus citations

Complete genome sequence of Sulfolobus solfataricus strain 98/2 and evolved derivatives

McCarthy, S., Gradnigo, J., Johnson, T., Payne, S., Lipzen, A., Martin, J., Schackwitz, W., Moriyama, E. & Blum, P., 2015, In : Genome Announcements. 3, 3, e00549-15.

Research output: Contribution to journalArticle

9 Scopus citations

Complete genome sequences of evolved arsenate-resistant Metallosphaera sedula strains

Ai, C., McCarthy, S., Schackwitz, W., Martin, J., Lipzen, A. & Blum, P., 2015, In : Genome Announcements. 3, 5, e01142-15.

Research output: Contribution to journalArticle

4 Scopus citations

Effects of thermodynamically coupled reaction diffusion in microalgae growth and lipid accumulation: Model development and stability analysis

Tevatia, R., Demirel, Y., Rudrappa, D. & Blum, P., Apr 6 2015, In : Computers and Chemical Engineering. 75, p. 28-39 12 p.

Research output: Contribution to journalArticle

3 Scopus citations

Identification of an archaeal mercury regulon by chromatin immunoprecipitation

Rudrappa, D., Yao, A. I., White, D., Pavlik, B. J., Singh, R., Facciotti, M. T. & Blum, P., Dec 2015, In : Microbiology (United Kingdom). 161, 12, p. 2423-2433 11 p.

Research output: Contribution to journalArticle

4 Scopus citations

The taurine biosynthetic pathway of microalgae

Tevatia, R., Allen, J., Rudrappa, D., White, D., Clemente, T. E., Cerutti, H., Demirel, Y. & Blum, P., May 1 2015, In : Algal Research. 9, p. 21-26 6 p.

Research output: Contribution to journalArticle

19 Scopus citations
2014

Identification and codon reading properties of 5-cyanomethyl uridine, a new modified nucleoside found in the anticodon wobble position of mutant haloarchaeal isoleucine tRNAs

Mandal, D., Köhrer, C., Su, D., Babu, I. R., Chan, C. T. Y., Liu, Y., Söll, D., Blum, P., Kuwahara, M., Dedon, P. C. & Rajbhandary, U. L., Feb 2014, In : RNA. 20, 2, p. 177-188 12 p.

Research output: Contribution to journalArticle

11 Scopus citations

Influence of subenvironmental conditions and thermodynamic coupling on a simple reaction-transport process in biochemical systems

Tevatia, R., Demirel, Y. & Blum, P., May 7 2014, In : Industrial and Engineering Chemistry Research. 53, 18, p. 7637-7647 11 p.

Research output: Contribution to journalArticle

4 Scopus citations

Modeling of rhythmic behavior in neutral lipid production due to continuous supply of limited nitrogen: Mutual growth and lipid accumulation in microalgae

Tevatia, R., Allen, J., Blum, P., Demirel, Y. & Black, P., Oct 2014, In : Bioresource Technology. 170, p. 152-159 8 p.

Research output: Contribution to journalArticle

14 Scopus citations

Role of an archaeal PitA transporter in the copper and arsenic resistance of Metallosphaera sedula, an extreme thermoacidophile

McCarthy, S., Ai, C., Wheaton, G., Tevatia, R., Eckrich, V., Kelly, R. & Blum, P., 2014, In : Journal of bacteriology. 196, 20, p. 3562-3570 9 p.

Research output: Contribution to journalArticle

17 Scopus citations
2013

Role of MerH in mercury resistance in the archaeon Sulfolobus solfataricus

Schelert, J., Rudrappa, D., Johnson, T. & Blum, P., Jun 1 2013, In : Microbiology (United Kingdom). 159, PART 6, p. 1198-1208 11 p.

Research output: Contribution to journalArticle

13 Scopus citations
2012

Carbohydrate hydrolysis and transport in the extreme thermoacidophile Sulfolobus solfataricus

Lalithambika, S., Peterson, L., Dana, K. & Blum, P., Nov 2012, In : Applied and environmental microbiology. 78, 22, p. 7931-7938 8 p.

Research output: Contribution to journalArticle

5 Scopus citations

Kinetic modeling of photoautotropic growth and neutral lipid accumulation in terms of ammonium concentration in Chlamydomonas reinhardtii

Tevatia, R., Demirel, Y. & Blum, P., Sep 2012, In : Bioresource Technology. 119, p. 419-424 6 p.

Research output: Contribution to journalArticle

29 Scopus citations

Metal resistance and lithoautotrophy in the extreme thermoacidophile Metallosphaera sedula

Maezato, Y., Johnson, T., McCarthy, S., Dana, K. & Blum, P., Oct 2012, In : Journal of bacteriology. 194, 24, p. 6856-6863 8 p.

Research output: Contribution to journalArticle

31 Scopus citations

Survival of the fittest: Overcoming oxidative stress at the extremes of acid, heat and metal

Maezato, Y. & Blum, P., Aug 23 2012, In : Life. 2, 3, p. 229-242 14 p.

Research output: Contribution to journalReview article

9 Scopus citations

Uranium extremophily is an adaptive, rather than intrinsic, feature for extremely thermoacidophilic Metallosphaera species

Mukherjee, A., Wheaton, G. H., Blum, P. H. & Kelly, R. M., Oct 9 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 41, p. 16702-16707 6 p.

Research output: Contribution to journalArticle

30 Scopus citations
2011

CopR of Sulfolobus solfataricus represents a novel class of archaeal-specific copper-responsive activators of transcription

Villafane, A., Voskoboynik, Y., Ruhl, I., Sannino, D., Maezato, Y., Blum, P. & Bini, E., Oct 2011, In : Microbiology. 157, 10, p. 2808-2817 10 p.

Research output: Contribution to journalArticle

24 Scopus citations

Engineering thermoacidophilic archaea using linear DNA recombination

Maezato, Y., Dana, K. & Blum, P., 2011, Strain Engineering: Methods and Protocols. Williams, J. (ed.). p. 435-445 11 p. (Methods in Molecular Biology; vol. 765).

Research output: Chapter in Book/Report/Conference proceedingChapter

17 Scopus citations

VapC6, a ribonucleolytic toxin regulates thermophilicity in the crenarchaeote Sulfolobus solfataricus

Maezato, Y., Daugherty, A., Dana, K., Soo, E., Cooper, C., Tachdjian, S., Kelly, R. M. & Blum, P., Jul 2011, In : RNA. 17, 7, p. 1381-1392 12 p.

Research output: Contribution to journalArticle

25 Scopus citations
2010

Agmatidine, a modified cytidine in the anticodon of archaeal tRNA Ile, base pairs with adenosine but not with guanosine

Mandal, D., Köhrer, C., Su, D., Russell, S. P., Krivos, K., Castleberry, C. M., Blum, P., Limbach, P. A., Söll, D. & RajBhandary, U. L., Feb 16 2010, In : Proceedings of the National Academy of Sciences of the United States of America. 107, 7, p. 2872-2877 6 p.

Research output: Contribution to journalArticle

80 Scopus citations

Extremophile-inspired strategies for enzymatic biomass saccharification

Miller, P. S. & Blum, P. H., Jul 2010, In : Environmental Technology. 31, 8-9, p. 1005-1015 11 p.

Research output: Contribution to journalReview article

28 Scopus citations

Structural insight into dynamic bypass of the major cisplatin-DNA adduct by Y-family polymerase Dpo4

Wong, J. H. Y., Brown, J. A., Suo, Z., Blum, P., Nohmi, T. & Ling, H., Jun 16 2010, In : EMBO Journal. 29, 12, p. 2059-2069 11 p.

Research output: Contribution to journalArticle

26 Scopus citations

Use of a robust dehydrogenase from an archael hyperthermophile in asymmetric catalysis-dynamic reductive kinetic resolution entry into (s)-profens

Friest, J. A., Maezato, Y., Broussy, S., Blum, P. & Berkowitz, D. B., May 5 2010, In : Journal of the American Chemical Society. 132, 17, p. 5930-5931 2 p.

Research output: Contribution to journalArticle

62 Scopus citations
2009

Role of vapBC toxin-antitoxin loci in the thermal stress response of Sulfolobus solfataricus

Cooper, C. R., Daugherty, A. J., Tachdjian, S., Blum, P. H. & Kelly, R. M., 2009, In : Biochemical Society Transactions. 37, 1, p. 123-126 4 p.

Research output: Contribution to journalArticle

40 Scopus citations

Something old, something new, something borrowed; how the thermoacidophilic archaeon Sulfolobus solfataricus responds to oxidative stress

Maaty, W. S., Wiedenheft, B., Tarlykov, P., Schaff, N., Heinemann, J., Robison-Cox, J., Valenzuela, J., Dougherty, A., Blum, P., Lawrence, C. M., Douglas, T., Young, M. J. & Bothner, B., Sep 16 2009, In : PloS one. 4, 9, e6964.

Research output: Contribution to journalArticle

54 Scopus citations
2008

Plasmid transformation and expression of the firefly luciferase in Microbacterium testaceum type and endophytic colonizing field strains

Zinniel, D. K., Feng, Z., Blum, P. H., Barletta, R. G. & Vidaver, A. K., Nov 2008, In : Canadian journal of microbiology. 54, 11, p. 964-970 7 p.

Research output: Contribution to journalArticle

4 Scopus citations
106 Scopus citations
2007

Flagellar motility and structure in the hyperthermoacidophilic archaeon Sulfolobus solfataricus

Szabó, Z., Sani, M., Groeneveld, M., Zolghadr, B., Schelert, J., Albers, S. V., Blum, P., Boekema, E. J. & Driessen, A. J. M., Jun 2007, In : Journal of bacteriology. 189, 11, p. 4305-4309 5 p.

Research output: Contribution to journalArticle

57 Scopus citations
2006

Regulation of mercury resistance in the crenarchaeote Sulfolobus solfataricus

Schelert, J., Drozda, M., Dixit, V., Dillman, A. & Blum, P., Oct 2006, In : Journal of bacteriology. 188, 20, p. 7141-7150 10 p.

Research output: Contribution to journalArticle

52 Scopus citations

Structure of the Sulfolobus solfataricus α-Glucosidase: Implications for Domain Conservation and Substrate Recognition in GH31

Ernst, H. A., Lo Leggio, L., Willemoës, M., Leonard, G., Blum, P. & Larsen, S., May 12 2006, In : Journal of Molecular Biology. 358, 4, p. 1106-1124 19 p.

Research output: Contribution to journalArticle

94 Scopus citations
2005

Characterization of different crystal forms of the α-glucosidase MalA from Sulfolobus solfataricus

Ernst, H. A., Willemoës, M., Lo Leggio, L., Leonard, G., Blum, P. & Larsen, S., 2005, In : Acta Crystallographica Section F: Structural Biology and Crystallization Communications. 61, 12, p. 1039-1042 4 p.

Research output: Contribution to journalArticle

5 Scopus citations

Community analysis of a mercury hot spring supports occurrence of domain-specific forms of mercuric reductase

Simbahan, J., Kurth, E., Schelert, J., Dillman, A., Moriyama, E., Jovanovich, S. & Blum, P., Dec 2005, In : Applied and environmental microbiology. 71, 12, p. 8836-8845 10 p.

Research output: Contribution to journalArticle

36 Scopus citations
2004

A freestanding proofreading domain is required for protein synthesis quality control in Archaea

Korencic, D., Ahel, I., Schelert, J., Sacher, M., Ruan, B., Stathopoulos, C., Blum, P., Ibba, M. & Söll, D., Jul 13 2004, In : Proceedings of the National Academy of Sciences of the United States of America. 101, 28, p. 10260-10265 6 p.

Research output: Contribution to journalArticle

82 Scopus citations
43 Scopus citations

Culture-independent analysis of fecal enterobacteria in environmental samples by single-cell mRNA profiling

Chen, H., Ponniah, G., Salonen, N. & Blum, P., Aug 2004, In : Applied and environmental microbiology. 70, 8, p. 4432-4439 8 p.

Research output: Contribution to journalArticle

10 Scopus citations