Sanjukta Bhowmick, PhD

  • 307 Citations
  • 10 h-Index
20022020

Research output per year

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Research Output

2020

A probabilistic infection model for efficient trace-prediction of disease outbreaks in contact networks

Qian, W., Bhowmick, S., O’Neill, M., Ramisetty-Mikler, S. & Mikler, A. R., 2020, Computational Science – ICCS 2020 - 20th International Conference, Proceedings. Krzhizhanovskaya, V. V., Závodszky, G., Lees, M. H., Sloot, P. M. A., Sloot, P. M. A., Sloot, P. M. A., Dongarra, J. J., Brissos, S. & Teixeira, J. (eds.). Springer, p. 676-689 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12137 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

On the planarity of validated complexes of model organisms in protein-protein interaction networks

Cooper, K., Cornelius, N., Gasper, W., Bhowmick, S. & Ali, H., 2020, Computational Science – ICCS 2020 - 20th International Conference, Proceedings. Krzhizhanovskaya, V. V., Závodszky, G., Lees, M. H., Sloot, P. M. A., Sloot, P. M. A., Sloot, P. M. A., Dongarra, J. J., Brissos, S. & Teixeira, J. (eds.). Springer, p. 652-666 15 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12137 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
2019

An Empirical Study of the Effect of Noise Models on Centrality Metrics

Sarkar, S., Karn, A., Mukherjee, A. & Bhowmick, S., 2019, Springer Proceedings in Complexity. Springer, p. 3-21 19 p. (Springer Proceedings in Complexity).

Research output: Chapter in Book/Report/Conference proceedingChapter

A Shared-Memory Algorithm for Updating Single-Source Shortest Paths in Large Weighted Dynamic Networks

Srinivasan, S., Riazi, S., Norris, B., Das, S. K. & Bhowmick, S., Feb 8 2019, Proceedings - 25th IEEE International Conference on High Performance Computing, HiPC 2018. Institute of Electrical and Electronics Engineers Inc., p. 245-254 10 p. 8638105. (Proceedings - 25th IEEE International Conference on High Performance Computing, HiPC 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Preface

Xie, N., Bera, D., Chen, S. C., Bhowmick, S., Shobha, G., Agrawal, R., Prasad, S. & Bogaerts, S., Aug 2019, In : 2019 12th International Conference on Contemporary Computing, IC3 2019. 8844909.

Research output: Contribution to journalEditorial

Single-Source Shortest Path Tree for Big Dynamic Graphs

Riazi, S., Srinivasan, S., Das, S. K., Bhowmick, S. & Norris, B., Jan 22 2019, Proceedings - 2018 IEEE International Conference on Big Data, Big Data 2018. Song, Y., Liu, B., Lee, K., Abe, N., Pu, C., Qiao, M., Ahmed, N., Kossmann, D., Saltz, J., Tang, J., He, J., Liu, H. & Hu, X. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 4054-4062 9 p. 8622042. (Proceedings - 2018 IEEE International Conference on Big Data, Big Data 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2018

On rich clubs of path-based centralities in networks

Sarkar, S., Bhowmick, S. & Mukherjee, A., Oct 17 2018, CIKM 2018 - Proceedings of the 27th ACM International Conference on Information and Knowledge Management. Paton, N., Candan, S., Wang, H., Allan, J., Agrawal, R., Labrinidis, A., Cuzzocrea, A., Zaki, M., Srivastava, D., Broder, A. & Schuster, A. (eds.). Association for Computing Machinery, p. 567-576 10 p. (International Conference on Information and Knowledge Management, Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Using core-periphery structure to predict high centrality nodes in time-varying networks

Sarkar, S., Sikdar, S., Bhowmick, S. & Mukherjee, A., Sep 1 2018, In : Data Mining and Knowledge Discovery. 32, 5, p. 1368-1396 29 p.

Research output: Contribution to journalArticle

1 Scopus citations
2017

Efficient Community Re-creation in Multilayer Networks Using Boolean Operations

Santra, A., Bhowmick, S. & Chakravarthy, S., 2017, In : Procedia Computer Science. 108, p. 58-67 10 p.

Research output: Contribution to journalConference article

4 Scopus citations

Gender assignment for directional full-duplex FDD nodes in a multihop wireless network

Parsinia, M., Peng, Q., Bhowmick, S., Matyjas, J. D. & Kumar, S., 2017, Ad Hoc Networks - 8th International Conference, ADHOCNETS 2016, Revised Selected Papers. Zhou, Y. & Kunz, T. (eds.). Springer Verlag, p. 390-401 12 p. (Lecture Notes of the Institute for Computer Sciences, Social-Informatics and Telecommunications Engineering, LNICST; vol. 184 LNICST).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Holistic analysis of multi-source, multi-feature data: Modeling and computation challenges

Santra, A. & Bhowmick, S., 2017, Big Data Analytics - 5th International Conference, BDA 2017, Proceedings. Sureka, A., Chakravarthy, S., Reddy, P. K. & Bhalla, S. (eds.). Springer Verlag, p. 59-68 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10721 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

HUBify: Efficient Estimation of Central Entities Across Multiplex Layer Compositions

Santra, A., Bhowmick, S. & Chakravarthy, S., Dec 15 2017, Proceeding - 17th IEEE International Conference on Data Mining Workshops, ICDMW 2017. Gottumukkala, R., Karypis, G., Raghavan, V., Wu, X., Miele, L., Aluru, S., Ning, X. & Dong, G. (eds.). IEEE Computer Society, p. 142-149 8 p. (IEEE International Conference on Data Mining Workshops, ICDMW; vol. 2017-November).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations
2016

Application of Graph Sparsification in Developing Parallel Algorithms for Updating Connected Components

Srinivasan, S., Bhowmick, S. & Das, S., Jul 18 2016, Proceedings - 2016 IEEE 30th International Parallel and Distributed Processing Symposium, IPDPS 2016. Institute of Electrical and Electronics Engineers Inc., p. 885-891 7 p. 7529954. (Proceedings - 2016 IEEE 30th International Parallel and Distributed Processing Symposium, IPDPS 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

GenPerm: A Unified Method for Detecting Non-Overlapping and Overlapping Communities

Chakraborty, T., Kumar, S., Ganguly, N., Mukherjee, A. & Bhowmick, S., Aug 1 2016, In : IEEE Transactions on Knowledge and Data Engineering. 28, 8, p. 2101-2114 14 p., 7452622.

Research output: Contribution to journalArticle

19 Scopus citations

High performance computing symposium (HPC'16)

Weinbub, J., Baboulin, M., Thacker, W., Polok, L. & Bhowmick, S., 2016, In : Simulation Series. 48, 4

Research output: Contribution to journalEditorial

Permanence and community structure in complex networks

Chakraborty, T., Srinivasan, S., Ganguly, N., Mukherjee, A. & Bhowmick, S., Nov 2016, In : ACM Transactions on Knowledge Discovery from Data. 11, 2, 14.

Research output: Contribution to journalArticle

5 Scopus citations

Sensitivity and reliability in incomplete networks: Centrality metrics to community scoring functions

Sarkar, S., Kumar, S., Bhowmick, S. & Mukherjee, A., Nov 21 2016, Proceedings of the 2016 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, ASONAM 2016. Kumar, R., Caverlee, J. & Tong, H. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 69-72 4 p. 7752215. (Proceedings of the 2016 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, ASONAM 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Understanding stability of noisy networks through centrality measures and local connections

Ufimtsev, V., Sarkar, S., Mukherjee, A. & Bhowmick, S., Oct 24 2016, CIKM 2016 - Proceedings of the 2016 ACM Conference on Information and Knowledge Management. Association for Computing Machinery, p. 2347-2352 6 p. (International Conference on Information and Knowledge Management, Proceedings; vol. 24-28-October-2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations
2015

A new augmentation based algorithm for extracting maximal chordal subgraphs

Bhowmick, S., Chen, T. Y. & Halappanavar, M., Feb 2015, In : Journal of Parallel and Distributed Computing. 76, p. 132-144 13 p.

Research output: Contribution to journalArticle

2014

An extremely fast algorithm for identifying high closeness centrality vertices in large-scale networks

Ufimtsev, V. & Bhowmick, S., Nov 16 2014, Proceedings of IA3 2014 - 4th Workshop on Irregular Applications: Architectures and Algorithms, Held in conjunction with SC 2014: The International Conference for High Performance Computing, Networking, Storage and Analysis. Association for Computing Machinery, Inc, p. 53-56 4 p. (Proceedings of IA3 2014 - 4th Workshop on Irregular Applications: Architectures and Algorithms, Held in conjunction with SC 2014: The International Conference for High Performance Computing, Networking, Storage and Analysis).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Building blocks for graph based network analysis

Ufimtsev, V., Bhowmick, S. & Rajamanickam, S., Feb 11 2014, 2014 IEEE High Performance Extreme Computing Conference, HPEC 2014. Institute of Electrical and Electronics Engineers Inc., 7040982. (2014 IEEE High Performance Extreme Computing Conference, HPEC 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Identifying important classes of large software systems through K-core decomposition

Meyer, P., Siy, H. & Bhowmick, S., Dec 28 2014, In : Advances in Complex Systems. 17, 7-8, 1550004.

Research output: Contribution to journalArticle

18 Scopus citations

On the permanence of vertices in network communities

Chakraborty, T., Srinivasan, S., Ganguly, N., Mukherjee, A. & Bhowmick, S., 2014, KDD 2014 - Proceedings of the 20th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining. Association for Computing Machinery, p. 1396-1405 10 p. (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

60 Scopus citations
2013

Analysis of incrementally generated clusters in biological networks using graph-theoretic filters and ontology enrichment

West, S., Dempsey, K., Bhowmick, S. & Ali, H., 2013, Proceedings - IEEE 13th International Conference on Data Mining Workshops, ICDMW 2013. IEEE Computer Society, p. 584-591 8 p. 6753973

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A structure-preserving hybrid-chordal filter for sampling in correlation networks

Dempsey, K., Chen, T. Y., Srinivasan, S., Bhowmick, S. & Ali, H., 2013, Proceedings of the 2013 International Conference on High Performance Computing and Simulation, HPCS 2013. p. 243-250 8 p. 6641422. (Proceedings of the 2013 International Conference on High Performance Computing and Simulation, HPCS 2013).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

A template for parallelizing the louvain method for modularity maximization

Bhowmick, S. & Srinivasan, S., 2013, Modeling and Simulation in Science, Engineering and Technology. Springer Basel, p. 111-124 14 p. (Modeling and Simulation in Science, Engineering and Technology; vol. 55).

Research output: Chapter in Book/Report/Conference proceedingChapter

8 Scopus citations

Constant communities in complex networks

Chakraborty, T., Srinivasan, S., Ganguly, N., Bhowmick, S. & Mukherjee, A., 2013, In : Scientific reports. 3, 1825.

Research output: Contribution to journalArticle

19 Scopus citations

Identifying high betweenness centrality vertices in large noisy networks

Ufimtsev, V. & Bhowmick, S., 2013, Proceedings - IEEE 27th International Parallel and Distributed Processing Symposium Workshops and PhD Forum, IPDPSW 2013. IEEE Computer Society, p. 2234-2237 4 p. 6651138. (Proceedings - IEEE 27th International Parallel and Distributed Processing Symposium Workshops and PhD Forum, IPDPSW 2013).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Improving classifications through graph embeddings

Chatterjee, A., Bhowmick, S. & Raghavan, P., Jan 1 2013, Graph Embedding for Pattern Analysis. Springer New York, p. 119-138 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2012

A comparison between hierarchical clustering and community detection method in the collection of gene targets for molecular identification of pathogenic fungi

Thapa, I., Bhowmick, S. & Bastola, D. R., 2012, Proceedings - 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2012. p. 756-761 6 p. 6470234. (Proceedings - 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A comparison of computational approaches in the molecular identification of pathogenic organisms

Bastola, D. R., McGrath, S., Bhowmick, S. & Thapa, I., 2012, Proceedings - 2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012. 1 p. 6366198. (Proceedings - 2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A novel multithreaded algorithm for extracting maximal chordal subgraphs

Halappanavar, M., Feo, J., Dempsey, K., Ali, H. & Bhowmick, S., 2012, Proceedings - 41st International Conference on Parallel Processing, ICPP 2012. p. 58-67 10 p. 6337567. (Proceedings of the International Conference on Parallel Processing).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Function-preserving filters for sampling in biological networks

Dempsey, K., Bhowmick, S. & Ali, H., 2012, Procedia Computer Science. Elsevier, Vol. 9. p. 587-595 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

7 Scopus citations

On the design of advanced filters for biological networks using graph theoretic properties

Dempsey, K., Chen, T. Y., Bhowmick, S. & Ali, H., 2012, Proceedings - 2012 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2012. p. 556-560 5 p. 6392617. (Proceedings - 2012 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

The development of parallel adaptive sampling algorithms for analyzing biological networks

Dempsey, K., Duraisamy, K., Bhowmick, S. & Ali, H., 2012, Proceedings of the 2012 IEEE 26th International Parallel and Distributed Processing Symposium Workshops, IPDPSW 2012. p. 725-734 10 p. 6270712. (Proceedings of the 2012 IEEE 26th International Parallel and Distributed Processing Symposium Workshops, IPDPSW 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

7 Scopus citations
2011

A noise reducing sampling approach for uncovering critical properties in large scale biological networks

Duraisamy, K., Dempsey, K., Ali, H. & Bhowmick, S., 2011, Proceedings of the 2011 International Conference on High Performance Computing and Simulation, HPCS 2011. p. 721-728 8 p. 5999898. (Proceedings of the 2011 International Conference on High Performance Computing and Simulation, HPCS 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

12 Scopus citations

A parallel graph sampling algorithm for analyzing gene correlation networks

Dempsey, K., Duraisamy, K., Ali, H. & Bhowmick, S., 2011, Procedia Computer Science. Vol. 4. p. 136-145 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

16 Scopus citations

Fast community detection for dynamic complex networks

Bansal, S., Bhowmick, S. & Paymal, P., 2011, Complex Networks - Second International Workshop, CompleNet 2010, Revised Selected Papers. p. 196-207 12 p. (Communications in Computer and Information Science; vol. 116 CCIS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

30 Scopus citations

Measuring disruption from software evolution activities using graph-based metrics

Paymal, P., Patil, R., Bhowmick, S. & Siy, H., 2011, Proceedings of the 27th IEEE International Conference on Software Maintenance, ICSM 2011. p. 532-535 4 p. 6080825. (IEEE International Conference on Software Maintenance, ICSM).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Message from the workshop chairs

Aluru, S., Bader, D. A., Kalyanaraman, A., Agarwal, G., Aubanel, E., Bhowmick, S., Çatalyürek, Ü., Chaudhary, V., Clement, M., Feng, W., Germain, R., Herbordt, M., Lin, H., Madduri, K., Meier, H., Oehmen, C., Rougemont, J., Samatova, N., Schmidt, B., Stamatakis, A. & 6 others, Straatsma, T. P., Taufer, M., Tseng, C. W., Williams, T., Zola, J. & Zomaya, A., 2011, In : IEEE International Symposium on Parallel and Distributed Processing Workshops and Phd Forum. 1 p., 6008861.

Research output: Contribution to journalEditorial

2010
1 Scopus citations

Application of alternating decision trees in selecting sparse linear solvers

Bhowmick, S., Eijkhout, V., Freund, Y., Fuentes, E. & Keyes, D., 2010, Software Automatic Tuning: From Concepts to State-of-the-Art Results. Springer New York, p. 153-173 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

7 Scopus citations

Feature subspace transformations for enhancing K-means clustering

Chatterjee, A., Bhowmick, S. & Raghavan, P., 2010, CIKM'10 - Proceedings of the 19th International Conference on Information and Knowledge Management and Co-located Workshops. p. 1801-1804 4 p. (International Conference on Information and Knowledge Management, Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Towards high-quality, untangled meshes via a force-directed graph embedding approach

Bhowmick, S. & Shontz, S. M., 2010, In : Procedia Computer Science. 1, 1, p. 357-366 10 p.

Research output: Contribution to journalArticle

Open Access
14 Scopus citations
2009

Towards low-cost, high-accuracy classifiers for linear solver selection

Bhowmick, S., Toth, B. & Raghavan, P., 2009, Computational Science - ICCS 2009 - 9th International Conference, Proceedings. PART 1 ed. p. 463-472 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5544 LNCS, no. PART 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

10 Scopus citations
2008

A polynomial-time algorithm for detecting directed axial symmetry in Hessian computational graphs

Bhowmick, S. & Hovland, P. D., 2008, Advances in Automatic Differentiation. p. 91-102 12 p. (Lecture Notes in Computational Science and Engineering; vol. 64 LNCSE).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Improving the performance of graph coloring algorithms through backtracking

Bhowmick, S. & Hovland, P. D., 2008, Computational Science - ICCS 2008 - 8th International Conference, Proceedings. PART 1 ed. p. 873-882 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5101 LNCS, no. PART 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations
2007

Middleware for dynamic adaptation of component applications

Norris, B., Bhowmick, S., Kaushik, D. & McInnes, L. C., 2007, Grid-Based Problem Solving Environments: IFIP TC2/ WG 2.5 Working Conference on Grid-Based Problem Solving Environments: Implications for Development and Deployment of Numerical Software. Gaffney, P. W. & Pool, J. C. T. (eds.). p. 127-149 23 p. (IFIP International Federation for Information Processing; vol. 239).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations
2006

Combinatorial algorithms enabling computational science: Tales from the front

Bhowmick, S., Boman, E. G., Devine, K., Gebremedhin, A., Hendrickson, B., Hovland, P., Munson, T. & Pothen, A., Oct 1 2006, In : Journal of Physics: Conference Series. 46, 1, p. 453-457 5 p., 062.

Research output: Contribution to journalArticle