Simon Sherman, PhD

  • 3079 Citations
  • 27 h-Index
1984 …2019

Research output per year

If you made any changes in Pure these will be visible here soon.

Research Output

1985

Opredelenie i sravnitel'nyǐ analiz konformatsiǐ ostova belkovykh molekul bych'ego pankreaticheskogo ingibitora tripsina i ingibitorov tripsina E i K na osnove dannykh dvumernoǐ 1H-IaMR-spektroskopii.

Translated title of the contribution: Determination and comparative analysis of the conformation of bovine pancreatic trypsin inhibitor and trypsin inhibitors E and K from the data of two-dimensional 1H-NMR spectroscopySherman, S. A. & Andrianov, A. M., Sep 1985, In : Molekuliarnaia biologiia. 19, 5, p. 1301-1309 9 p.

Research output: Contribution to journalArticle

7 Scopus citations
1986

Methods of establishing the conformations of amino acid residues of protein molecules by n.m.r. spectroscopy

Sherman, S. A., Andrianov, A. M., Degtereva, L. N. & Rakova, A. A., 1986, In : Biophysics. 31, 6, p. 1135-1136 2 p.

Research output: Contribution to journalArticle

1987

Method of determining protein conformations by the two-dimensional nuclear overhauser enhancement spectroscopy data

Sherman, S. A., Andrianov, A. M. & Akhrem, A. A., Apr 1987, In : Journal of Biomolecular Structure and Dynamics. 4, 5, p. 869-884 16 p.

Research output: Contribution to journalArticle

44 Scopus citations

Ustanovlenie prostranstvennoǐ struktury apamina v rastvore. Konformatsionyǐ analiz po dannym dvumernoǐ spektroskopii iadernogo éffekta Overkhauzera.

Translated title of the contribution: Determination of apamin conformation in a solution. Conformation analysis of the data of two-dimensional nuclear Overhauser enhancement spectroscopySherman, S. A., Andrianov, A. M. & Akhrem, A. A., 1987, In : Doklady Akademii nauk SSSR. 293, 2, p. 472-476 5 p.

Research output: Contribution to journalArticle

1 Scopus citations

Vzaimosviaz' spektral'nykh parametrov IaMR s konformatsionnymi kharakteristikami ostova aminokislotnykh ostatkov. Analiz élementov vtorichnoǐ struktury belkov.

Translated title of the contribution: Relation between the spectral NMR parameters and conformation characteristics of the amino acid residue backbone. Analysis of elements of the secondary structure of proteinsSherman, S. A. & Andrianov, A. M., Nov 1987, In : Molekulyarnaya Biologiya. 21, 6, p. 1573-1581 9 p.

Research output: Contribution to journalArticle

4 Scopus citations
1988
27 Scopus citations
1989

Ot ustanovlenii konformatsiǐ aminokislotnykh ostatkov k rekonstruktsii prostranstvennoǐ struktury belkov (po dannym spektroskopii iadernogo éffekta Overkhauzera).

Translated title of the contribution: From determination of amino acid residue conformation to reconstruction of the spatial structure of proteins (from the data of nuclear Overhauser enhancement spectroscopySherman, S. A. & Andrianov, A. M., Sep 1989, In : Molekulyarnaya Biologiya. 23, 5, p. 1234-1242 9 p.

Research output: Contribution to journalArticle

3 Scopus citations
1990

Determination of glucagon conformation in lipid environment from data yielded by two-dimensional nuclear overhauser effect spectroscopy

Andrianov, A. M., Sherman, S. A. & Akhrem, A. A., 1990, In : Doklady Biophysics. 310-312, p. 13-16 4 p.

Research output: Contribution to journalArticle

Opredelenie konformatsii gliukagona v lipidnom okruzhenii po dannym dvumernoǐ spektroskopii iadernogo éffekta Overkhauzera.

Translated title of the contribution: Determination of glucagon conformation in lipid environment based on the data of two-dimensional Overhauser effect spectroscopyAndrianov, A. M., Sherman, S. A. & Akhrem, A. A., 1990, In : Doklady Akademii nauk SSSR. 310, 3, p. 724-727 4 p.

Research output: Contribution to journalArticle

1992
11 Scopus citations
1993

1H NMR-based determination of the three-dimensional structure of the human plasma fibronectin fragment containing inter-chain disulfide bonds

Kar, L., Lai, C. S., Wolff, C. E., Nettesheim, D., Sherman, S. & Johnson, M. E., 1993, In : Journal of Biological Chemistry. 268, 12, p. 8580-8589 10 p.

Research output: Contribution to journalArticle

7 Scopus citations

Derivation of locally accurate spatial protein structure from NMR data

Sherman, S. A. & Johnson, M. E., 1993, In : Progress in Biophysics and Molecular Biology. 59, 3, p. 285-339 55 p.

Research output: Contribution to journalReview article

34 Scopus citations
1994
16 Scopus citations

Decapeptide Agonists of Human C5a: The Relationship between Conformation and Spasmogenic and Platelet Aggregatory Activities

Sanderson, S. D., Kimarsky, L., Sherman, S. A., Ember, J. A., Finch, A. M. & Taylor, S. M., Sep 1 1994, In : Journal of Medicinal Chemistry. 37, 19, p. 3171-3180 10 p.

Research output: Contribution to journalArticle

32 Scopus citations
1995

A linear 23-residue peptide reveals a propensity to form an unusual native-like conformation

Sherman, S. A., Gmeiner, W. H., Kirnarskiy, L., Perini, F. & Ruddon, R. W., Dec 1995, In : Journal of Biomolecular Structure and Dynamics. 13, 3, p. 441-446 6 p.

Research output: Contribution to journalArticle

9 Scopus citations

Decapeptide Agonists of Human C5a: The Relationship between Conformation and Neutrophil Response

Sanderson, S. D., Kimarsky, L., Sherman, S. A., Vogen, S. M., Prakash, O., Finch, A. M., Taylor, S. M. & Ember, J. A., Sep 1 1995, In : Journal of Medicinal Chemistry. 38, 18, p. 3669-3675 7 p.

Research output: Contribution to journalArticle

26 Scopus citations
1996

Improvement in accuracy of protein local structure determination from NMR data

Sherman, S., Sclove, S., Kirnarsky, L., Tomchin, I. & Shats, O., Sep 27 1996, In : Journal of Molecular Structure: THEOCHEM. 368, 1-3 SPEC. ISS., p. 153-161 9 p.

Research output: Contribution to journalArticle

6 Scopus citations

Protein folding in the endoplasmic reticulum: Lessons from the human chorionic gonadotropin β subunit

Ruddon, R. W., Sherman, S. A. & Bedows, E., Aug 1996, In : Protein Science. 5, 8, p. 1443-1452 10 p.

Research output: Contribution to journalReview article

66 Scopus citations
1997

A priori and a posteriori mixture distributions for using databases in protein structure determination

Sclove, S. L. & Sherman, S. A., Dec 8 1997, In : Journal of Molecular Structure: THEOCHEM. 419, 1-3, p. 245-255 11 p.

Research output: Contribution to journalArticle

2 Scopus citations

Biologically active conformer of the effector region of human C5a and modulatory effects of N-terminal receptor binding determinants on activity

Finch, A. M., Vogen, S. M., Sherman, S. A., Kirnarsky, L., Taylor, S. M. & Sanderson, S. D., Mar 14 1997, In : Journal of Medicinal Chemistry. 40, 6, p. 877-884 8 p.

Research output: Contribution to journalArticle

48 Scopus citations

Improving the efficiency of protein structure determination from NMR

Kirnarsky, L., Shats, O. & Sherman, S., Dec 8 1997, In : Journal of Molecular Structure: THEOCHEM. 419, 1-3, p. 213-220 8 p.

Research output: Contribution to journalArticle

5 Scopus citations
1998

NMR analysis of a potent decapeptide agonist of human C5a anaphylatoxin

Vogen, S. M., Prakash, O., Kirnarsky, L., Sanderson, S. D. & Sherman, S. A., 1998, In : Journal of Peptide Research. 51, 3, p. 226-234 9 p.

Research output: Contribution to journalArticle

7 Scopus citations

Stabilization of vasoactive intestinal peptide by lipids

Gololobov, G., Noda, Y., Sherman, S., Rubinstein, I., Baranowska-Kortylewicz, J. & Paul, S., 1998, In : Journal of Pharmacology and Experimental Therapeutics. 285, 2, p. 753-758 6 p.

Research output: Contribution to journalArticle

47 Scopus citations

Structural analysis of peptide substrates for mucin-type O- glycosylation

Kirnarsky, L., Nomoto, M., Ikematsu, Y., Hassan, H., Bennett, E. P., Cerny, R. L., Clausen, H., Hollingsworth, M. A. & Sherman, S., Sep 15 1998, In : Biochemistry. 37, 37, p. 12811-12817 7 p.

Research output: Contribution to journalArticle

33 Scopus citations
1999

Determination of structural elements related to the biological activities of a potent decapeptide agonist of human C5a anaphylatoxin

Vogen, S. M., Prakash, O., Kirnarsky, L., Sanderson, S. D. & Sherman, S. A., 1999, In : Journal of Peptide Research. 54, 1, p. 74-84 11 p.

Research output: Contribution to journalArticle

20 Scopus citations

SECOS: Sequence-conformation-structure database for amino acid residues in proteins

Shats, O., Vaisman, I. I., Shats, A. & Sherman, S., Jun 1999, In : Bioinformatics. 15, 6, p. 525-526 2 p.

Research output: Contribution to journalArticle

β-Hairpin stabilization in a 28-residue peptide derived from the β- subunit sequence of human chorionic gonadotropin hormone

Silva, R. A. G. D., Sherman, S. A. & Keiderling, T. A., Oct 5 1999, In : Biopolymers. 50, 4, p. 413-423 11 p.

Research output: Contribution to journalArticle

12 Scopus citations
2000

Folding studies on the human chorionic gonadotropin β-subunit using optical spectroscopy of peptide fragments

Gangani, R. A., Silva, D., Sherman, S. A., Perini, F., Bedows, E. & Keiderling, T. A., Sep 13 2000, In : Journal of the American Chemical Society. 122, 36, p. 8623-8630 8 p.

Research output: Contribution to journalArticle

14 Scopus citations

Structural effects of O-glycosylation on a 15-residue peptide from the mucin (MUC1) core protein

Kirnarsky, L., Prakash, O., Vogen, S. M., Nomoto, M., Hollingsworth, M. A. & Sherman, S., Oct 3 2000, In : Biochemistry. 39, 39, p. 12076-12082 7 p.

Research output: Contribution to journalArticle

62 Scopus citations
2001

Development of response-selective agonists of human C5a anaphylatoxin: Conformational, biological, and therapeutic considerations

Taylor, S. M., Sherman, S. A., Kirnarsky, L. & Sanderson, S. D., 2001, In : Current medicinal chemistry. 8, 6, p. 675-684 10 p.

Research output: Contribution to journalArticle

31 Scopus citations

Differential activities of decapeptide agonists of human C5a: The conformational effects of backbone N-methylation

Vogen, S. M., Paczkowski, N. J., Kirnarsky, L., Short, A., Whitmore, J. B., Sherman, S. A., Taylor, S. M. & Sanderson, S. D., 2001, In : International Immunopharmacology. 1, 12, p. 2151-2162 12 p.

Research output: Contribution to journalArticle

27 Scopus citations

Functional Contributions of Noncysteine Residues within the Cystine Knots of Human Chorionic Gonadotropin Subunits

Darling, R. J., Wilken, J. A., Miller-Lindholm, A. K., Urlacher, T. M., Ruddon, R. W., Sherman, S. A. & Bedows, E., Apr 6 2001, In : Journal of Biological Chemistry. 276, 14, p. 10692-10699 8 p.

Research output: Contribution to journalArticle

9 Scopus citations

Selenoprotein oxidoreductase with specificity for thioredoxin and glutathione systems

Sun, Q. A., Kirnarsky, L., Sherman, S. & Gladyshev, V. N., Mar 27 2001, In : Proceedings of the National Academy of Sciences of the United States of America. 98, 7, p. 3673-3678 6 p.

Research output: Contribution to journalArticle

212 Scopus citations
2002

Role of disulphide bond formation in folding, secretion, and assembly of human chorionic gonadotropin subunits

Bedows, E., Darling, R. J., Wilken, J. A. & Sherman, S. A., 2002, In : Indian journal of experimental biology. 40, 4, p. 467-476 10 p.

Research output: Contribution to journalArticle

1 Scopus citations
2003

Conformational studies on the MUC1 tandem repeat glycopeptides: Implication for the enzymatic O-glycosylation of the mucin protein core

Kinarsky, L., Suryanarayanan, G., Prakash, O., Paulsen, H., Clausen, H., Hanisch, F. G., Hollingsworth, M. A. & Sherman, S., Dec 2003, In : Glycobiology. 13, 12, p. 929-939 11 p.

Research output: Contribution to journalArticle

45 Scopus citations

Full-Length Dominant-Negative Survivin for Cancer Immunotherapy

Pisarev, V., Yu, B., Salup, R., Sherman, S., Altieri, D. C. & Gabrilovich, D. I., Dec 15 2003, In : Clinical Cancer Research. 9, 17, p. 6523-6533 11 p.

Research output: Contribution to journalArticle

94 Scopus citations

Grid-layout visualization method in the microarray data analysis interactive graphics toolkit

Xiao, L., Shats, O. & Sherman, S., 2003, Proceedings of the 36th Annual Hawaii International Conference on System Sciences, HICSS 2003. Sprague, R. H. (ed.). Institute of Electrical and Electronics Engineers Inc., 1174805. (Proceedings of the 36th Annual Hawaii International Conference on System Sciences, HICSS 2003).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations
2004

BCL2 translocation defines a unique tumor subset within the germinal center B-cell-like diffuse large B-cell lymphoma

Iqbal, J., Sanger, W. G., Horsman, D. E., Rosenwald, A., Pickering, D. L., Dave, B., Dave, S., Xiao, L., Cao, K., Zhu, Q., Sherman, S., Hans, C. P., Weisenburger, D. D., Greiner, T. C., Gascoyne, R. D., Ott, G., Müller-Hermelink, H. K., Delabie, J., Braziel, R. M., Jaffe, E. S. & 8 others, Campo, E., Lynch, J. C., Connors, J. M., Vose, J. M., Armitage, J. O., Grogan, T. M., Staudt, L. M. & Chan, W. C., Jul 2004, In : American Journal of Pathology. 165, 1, p. 159-166 8 p.

Research output: Contribution to journalArticle

217 Scopus citations

Distinct gene expression profiles in different B-cell compartments in human peripheral lymphoid organs

Shen, Y., Iqbal, J., Xiao, L., Lynch, R. C., Rosenwald, A., Staudt, L. M., Sherman, S., Dybkaer, K., Zhou, G., Eudy, J. D., Delabie, J., McKeithan, T. W. & Chan, W. C., Sep 15 2004, In : BMC Immunology. 5, 20.

Research output: Contribution to journalArticle

40 Scopus citations

Identification of disulfide bonds among the nine core 2 N-acetylglucosaminyltransferase-M cysteines conserved in the mucin β6-N-acetylglucosaminyltransferase family

Singh, J., Khan, G. A., Kinarsky, L., Cheng, H., Wilken, J., Choi, K. H., Bedows, E., Sherman, S. & Cheng, P. W., Sep 10 2004, In : Journal of Biological Chemistry. 279, 37, p. 38969-38977 9 p.

Research output: Contribution to journalArticle

6 Scopus citations

Influence of the solvent structure on the interactions in proteins

Rubinstein, A. & Sherman, S., Sep 2004, In : Biophysical journal. 87, 3, p. 1544-1557 14 p.

Research output: Contribution to journalArticle

39 Scopus citations

Microarray analysis of differential gene expression in androgen independent prostate cancer using a metastatic human prostate cancer cell line model

Balaji, K. C., Rao, P. S., Smith, D. J., Louis, S., Smith, L. M., Sherman, S., Bacich, D. & O'Keefe, D., Jul 2004, In : Urologic Oncology: Seminars and Original Investigations. 22, 4, p. 313-320 8 p.

Research output: Contribution to journalArticle

6 Scopus citations

Molecular dynamics simulations of the O-glycosylated 21-residue MUC1 peptides

Rubinstein, A., Kinarsky, L. & Sherman, S., Mar 2004, In : International journal of molecular sciences. 5, 3, p. 119-128 10 p.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

Molecular dynamics simulations of the O-glycosylated 21-residue MUC1 peptides

Rubinstein, A., Kinarsky, L. & Sherman, S., Mar 2004, In : International Journal of Molecular Sciences. 5, 3, p. 119-128 10 p.

Research output: Contribution to journalArticle

NMR-based structural studies of the glycosylated MUC1 tandem repeat peptide

Suryanarayanan, G., Keifer, P. A., Wang, G., Kinarsky, L., Hollingsworth, M. A. & Sherman, S., Mar 2004, In : International journal of molecular sciences. 5, 3, p. 84-92 9 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Suitability of Stratagene reference RNA for analysis of lymphoid tissues

Dybkær, K., Zhou, G., Iqbal, J., Kelly, D., Xiao, L., Sherman, S., D'Amore, F. & Chan, W. C., Sep 2004, In : BioTechniques. 37, 3, p. 470-474 5 p.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations
2005

Identification of genes important in predicting the overall survival in patients with follicular lymphoma

Xiao, L., Fu, K., Iqbal, J., Chan, W. C. & Sherman, S., 2005, Proceedings of the 2005 International Conference on Data Mining, DMIN'05. p. 181-186 6 p. (Proceedings of the 2005 International Conference on Data Mining, DMIN'05).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Identification of subunit- and antagonist-specific amino acid residues in the N-methyl-D-aspartate receptor glutamate-binding pocket

Kinarsky, L., Feng, B., Skifter, D. A., Morley, R. M., Sherman, S., Jane, D. E. & Monaghan, D. T., Jun 2005, In : Journal of Pharmacology and Experimental Therapeutics. 313, 3, p. 1066-1074 9 p.

Research output: Contribution to journalArticle

34 Scopus citations

MicroMultitest: Ranking differentially-expressed genes in microarray data

Xiao, L., Cao, L., Iqbal, J., Zhou, G., Chan, W. C. & Sherman, S., 2005, In : Proceedings of the Annual Hawaii International Conference on System Sciences. p. 279 1 p.

Research output: Contribution to journalConference article