Applying molecular communication theory to multi-scale integrated models of biological pathways

Zahmeeth Sakkaff; Bige Deniz Unluturk; Massimiliano Pierobon

doi:10.1145/3345312.3345495

Applying molecular communication theory to multi-scale integrated models of biological pathways

Zahmeeth Sakkaff, Bige Deniz Unluturk, Massimiliano Pierobon

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

3 Scopus citations

Abstract

The natural communication ability of cells is explored in this paper by providing preliminary results in the estimation of the Mutual Information (MI) of signaling pathway communication channels. These results, based on an application of Molecular Communication (MC) and information theory concepts to multi-scale integrated Flux-Balance Analysis (iFBA) models are a first step to evaluate the potential of cells and their biochemical processes as a substrate for enabling engineered MC channels for the future internet of Bio-Nano Things.

Original language	English (US)
Title of host publication	Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019
Publisher	Association for Computing Machinery, Inc
ISBN (Electronic)	9781450368971
DOIs	https://doi.org/10.1145/3345312.3345495
State	Published - Sep 25 2019
Event	6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019 - Dublin, Ireland Duration: Sep 25 2019 → Sep 27 2019

Publication series

Name	Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019

Conference

Conference	6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019
Country/Territory	Ireland
City	Dublin
Period	9/25/19 → 9/27/19

Keywords

Cell Signaling Pathways
Flux Balance Analysis
Molecular Communication
Mutual Information
Whole Cell Model

ASJC Scopus subject areas

Computational Theory and Mathematics
Communication
Computer Networks and Communications

Access to Document

10.1145/3345312.3345495

Cite this

Sakkaff, Z., Unluturk, B. D., & Pierobon, M. (2019). Applying molecular communication theory to multi-scale integrated models of biological pathways. In Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019 Article 3345495 (Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019). Association for Computing Machinery, Inc. https://doi.org/10.1145/3345312.3345495

Applying molecular communication theory to multi-scale integrated models of biological pathways. / Sakkaff, Zahmeeth; Unluturk, Bige Deniz; Pierobon, Massimiliano.
Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019. Association for Computing Machinery, Inc, 2019. 3345495 (Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Sakkaff, Z, Unluturk, BD & Pierobon, M 2019, Applying molecular communication theory to multi-scale integrated models of biological pathways. in Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019., 3345495, Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019, Association for Computing Machinery, Inc, 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019, Dublin, Ireland, 9/25/19. https://doi.org/10.1145/3345312.3345495

Sakkaff Z, Unluturk BD, Pierobon M. Applying molecular communication theory to multi-scale integrated models of biological pathways. In Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019. Association for Computing Machinery, Inc. 2019. 3345495. (Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019). doi: 10.1145/3345312.3345495

Sakkaff, Zahmeeth ; Unluturk, Bige Deniz ; Pierobon, Massimiliano. / Applying molecular communication theory to multi-scale integrated models of biological pathways. Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019. Association for Computing Machinery, Inc, 2019. (Proceedings of the 6th ACM International Conference on Nanoscale Computing and Communication, NANOCOM 2019).

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Applying molecular communication theory to multi-scale integrated models of biological pathways

Abstract

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Keywords

ASJC Scopus subject areas

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