Characterization of 35 microsatellite loci in the Pacific lion-paw scallop (Nodipecten subnodosus) and their cross-species amplification in four other scallops of the Pectinidae family

Ana M. Ibarra; Jessica L. Petersen; Thomas R. Famula; Bernie May

doi:10.1111/j.1471-8286.2005.01173.x

Characterization of 35 microsatellite loci in the Pacific lion-paw scallop (Nodipecten subnodosus) and their cross-species amplification in four other scallops of the Pectinidae family

Ana M. Ibarra, Jessica L. Petersen, Thomas R. Famula, Bernie May

Research output: Contribution to journal › Article › peer-review

12 Scopus citations

Abstract

Four microsatellite-enriched DNA libraries yielded 35 microsatellite loci from 100 primer pairs designed for Pacific lion-paw scallop, Nodipecten subnodosus. The number of alleles ranged from four to 28. Three of the 35 loci were not in Hardy-Weinberg equilibrium and linkage disequilibrium was found for one pair of loci. These microsatellites will be used to analyse the population structure of the species in Mexico's Baja Peninsula to propose management strategies for scallop aquaculture development. Twenty-six primer pairs cross-amplified in Nodipecten nodosus, whereas none (Argopecten ventricosus) or few cross-amplified in the Argopecten species.

Original language	English (US)
Pages (from-to)	153-156
Number of pages	4
Journal	Molecular Ecology Notes
Volume	6
Issue number	1
DOIs	https://doi.org/10.1111/j.1471-8286.2005.01173.x
State	Published - Mar 2006
Externally published	Yes

Keywords

Argopecten
Guerrero Negro - Ojo de Liebre lagoon
Microsatellite
Primers

ASJC Scopus subject areas

Biochemistry
Ecology
General Biochemistry, Genetics and Molecular Biology

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10.1111/j.1471-8286.2005.01173.x

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Characterization of 35 microsatellite loci in the Pacific lion-paw scallop (Nodipecten subnodosus) and their cross-species amplification in four other scallops of the Pectinidae family. / Ibarra, Ana M.; Petersen, Jessica L.; Famula, Thomas R. et al.
In: Molecular Ecology Notes, Vol. 6, No. 1, 03.2006, p. 153-156.

Research output: Contribution to journal › Article › peer-review

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abstract = "Four microsatellite-enriched DNA libraries yielded 35 microsatellite loci from 100 primer pairs designed for Pacific lion-paw scallop, Nodipecten subnodosus. The number of alleles ranged from four to 28. Three of the 35 loci were not in Hardy-Weinberg equilibrium and linkage disequilibrium was found for one pair of loci. These microsatellites will be used to analyse the population structure of the species in Mexico's Baja Peninsula to propose management strategies for scallop aquaculture development. Twenty-six primer pairs cross-amplified in Nodipecten nodosus, whereas none (Argopecten ventricosus) or few cross-amplified in the Argopecten species.",

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author = "Ibarra, {Ana M.} and Petersen, {Jessica L.} and Famula, {Thomas R.} and Bernie May",

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AU - Famula, Thomas R.

AU - May, Bernie

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Characterization of 35 microsatellite loci in the Pacific lion-paw scallop (Nodipecten subnodosus) and their cross-species amplification in four other scallops of the Pectinidae family

Abstract

Keywords

ASJC Scopus subject areas

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