Exome sequencing and advances in crop improvement

Devi Singh; Pankaj K. Singh; Sarika Chaudhary; Kamiya Mehla; Shashi Kumar

doi:10.1016/B978-0-12-394395-8.00003-7

Exome sequencing and advances in crop improvement

Devi Singh, Pankaj K. Singh, Sarika Chaudhary, Kamiya Mehla, Shashi Kumar

Research output: Contribution to journal › Article › peer-review

6 Scopus citations

Abstract

Next-generation sequencing strategies have opened new vistas for molecular plant breeding. The sequence information obtained by the advent of next-generation sequencing provides a valuable tool not only for improving domesticated crops but also for investigating the natural evolution of crops. Such information provides an enormous potential for sustainable agriculture. In this review, we discuss how such sequencing approaches have transformed exome sequencing into a practical utility that has enormous potential for crop improvement in agriculture. Furthermore, we also describe the future of crop improvement beyond the exome sequencing strategies.

Original language	English (US)
Pages (from-to)	87-121
Number of pages	35
Journal	Advances in Genetics
Volume	79
DOIs	https://doi.org/10.1016/B978-0-12-394395-8.00003-7
State	Published - 2012

Keywords

Crop improvement
DNA nanoball Sequencing
Exome
Metabolomics
MiRNA
Molecular Plant Breeding
Nanopore Sequencing
Next Generation Sequencing
Next-Next Generation Sequencing
Proteomics
Pyrosequencing
Reversible Terminator-Based Sequencing
RNA-Seq
Sequencing-by Ligation
Single Molecule Real-Time Sequencing
Single-Molecule RNAP Motion-Based Real-Time Sequencing
Transcriptomics
True Single Molecule Sequencing (TSMS)
UTR
Whole-Genome Sequencing

ASJC Scopus subject areas

Genetics

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title = "Exome sequencing and advances in crop improvement",

abstract = "Next-generation sequencing strategies have opened new vistas for molecular plant breeding. The sequence information obtained by the advent of next-generation sequencing provides a valuable tool not only for improving domesticated crops but also for investigating the natural evolution of crops. Such information provides an enormous potential for sustainable agriculture. In this review, we discuss how such sequencing approaches have transformed exome sequencing into a practical utility that has enormous potential for crop improvement in agriculture. Furthermore, we also describe the future of crop improvement beyond the exome sequencing strategies.",

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AU - Singh, Devi

AU - Singh, Pankaj K.

AU - Chaudhary, Sarika

AU - Mehla, Kamiya

AU - Kumar, Shashi

PY - 2012

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N2 - Next-generation sequencing strategies have opened new vistas for molecular plant breeding. The sequence information obtained by the advent of next-generation sequencing provides a valuable tool not only for improving domesticated crops but also for investigating the natural evolution of crops. Such information provides an enormous potential for sustainable agriculture. In this review, we discuss how such sequencing approaches have transformed exome sequencing into a practical utility that has enormous potential for crop improvement in agriculture. Furthermore, we also describe the future of crop improvement beyond the exome sequencing strategies.

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KW - Metabolomics

KW - MiRNA

KW - Molecular Plant Breeding

KW - Nanopore Sequencing

KW - Next Generation Sequencing

KW - Next-Next Generation Sequencing

KW - Proteomics

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KW - Whole-Genome Sequencing

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