TY - JOUR
T1 - Integration of CRISPR/Cas9 with artificial intelligence for improved cancer therapeutics
AU - Bhat, Ajaz A.
AU - Nisar, Sabah
AU - Mukherjee, Soumi
AU - Saha, Nirmalya
AU - Yarravarapu, Nageswari
AU - Lone, Saife N.
AU - Masoodi, Tariq
AU - Chauhan, Ravi
AU - Maacha, Selma
AU - Bagga, Puneet
AU - Dhawan, Punita
AU - Akil, Ammira Al Shabeeb
AU - El-Rifai, Wael
AU - Uddin, Shahab
AU - Reddy, Ravinder
AU - Singh, Mayank
AU - Macha, Muzafar A.
AU - Haris, Mohammad
N1 - Publisher Copyright:
© 2022, The Author(s).
PY - 2022/12
Y1 - 2022/12
N2 - Gene editing has great potential in treating diseases caused by well-characterized molecular alterations. The introduction of clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein 9 (Cas9)–based gene-editing tools has substantially improved the precision and efficiency of gene editing. The CRISPR/Cas9 system offers several advantages over the existing gene-editing approaches, such as its ability to target practically any genomic sequence, enabling the rapid development and deployment of novel CRISPR-mediated knock-out/knock-in methods. CRISPR/Cas9 has been widely used to develop cancer models, validate essential genes as druggable targets, study drug-resistance mechanisms, explore gene non-coding areas, and develop biomarkers. CRISPR gene editing can create more-effective chimeric antigen receptor (CAR)-T cells that are durable, cost-effective, and more readily available. However, further research is needed to define the CRISPR/Cas9 system’s pros and cons, establish best practices, and determine social and ethical implications. This review summarizes recent CRISPR/Cas9 developments, particularly in cancer research and immunotherapy, and the potential of CRISPR/Cas9-based screening in developing cancer precision medicine and engineering models for targeted cancer therapy, highlighting the existing challenges and future directions. Lastly, we highlight the role of artificial intelligence in refining the CRISPR system's on-target and off-target effects, a critical factor for the broader application in cancer therapeutics.
AB - Gene editing has great potential in treating diseases caused by well-characterized molecular alterations. The introduction of clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein 9 (Cas9)–based gene-editing tools has substantially improved the precision and efficiency of gene editing. The CRISPR/Cas9 system offers several advantages over the existing gene-editing approaches, such as its ability to target practically any genomic sequence, enabling the rapid development and deployment of novel CRISPR-mediated knock-out/knock-in methods. CRISPR/Cas9 has been widely used to develop cancer models, validate essential genes as druggable targets, study drug-resistance mechanisms, explore gene non-coding areas, and develop biomarkers. CRISPR gene editing can create more-effective chimeric antigen receptor (CAR)-T cells that are durable, cost-effective, and more readily available. However, further research is needed to define the CRISPR/Cas9 system’s pros and cons, establish best practices, and determine social and ethical implications. This review summarizes recent CRISPR/Cas9 developments, particularly in cancer research and immunotherapy, and the potential of CRISPR/Cas9-based screening in developing cancer precision medicine and engineering models for targeted cancer therapy, highlighting the existing challenges and future directions. Lastly, we highlight the role of artificial intelligence in refining the CRISPR system's on-target and off-target effects, a critical factor for the broader application in cancer therapeutics.
KW - Artificial intelligence
KW - CAR T-cells
KW - CRISPR/Cas9
KW - Cancer Immunotherapy
KW - Cancer biomarker
KW - Cancer precision medicine
KW - Drug resistance
KW - Epigenetics
KW - Genome engineering
UR - http://www.scopus.com/inward/record.url?scp=85142197867&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85142197867&partnerID=8YFLogxK
U2 - 10.1186/s12967-022-03765-1
DO - 10.1186/s12967-022-03765-1
M3 - Review article
C2 - 36401282
AN - SCOPUS:85142197867
SN - 1479-5876
VL - 20
JO - Journal of Translational Medicine
JF - Journal of Translational Medicine
IS - 1
M1 - 534
ER -