TY - JOUR
T1 - LMPD
T2 - LIPID MAPS proteome database.
AU - Cotter, Dawn
AU - Maer, Andreia
AU - Guda, Chittibabu
AU - Saunders, Brian
AU - Subramaniam, Shankar
PY - 2006/1/1
Y1 - 2006/1/1
N2 - The LIPID MAPS Proteome Database (LMPD) is an object-relational database of lipid-associated protein sequences and annotations. The initial release contains 2959 records, representing human and mouse proteins involved in lipid metabolism. UniProt IDs were obtained based on keyword search of KEGG and GO databases, and this LMPD protein list was then enhanced with annotations from UniProt, EntrezGene, ENZYME, GO, KEGG and other public resources. We also assigned associations with general lipid categories, based on GO and KEGG annotations. Users may search LMPD by database ID or keyword, and filter by species and/or lipid class associations; from the search results, one can then access a compilation of data relevant to each protein of interest, cross-linked to external databases. The LIPID MAPS Proteome Database (LMPD) is publicly available from the LIPID MAPS Consortium website (http://www.lipidmaps.org/). The direct URL is http://www.lipidmaps.org/data/proteome/index.cgi.
AB - The LIPID MAPS Proteome Database (LMPD) is an object-relational database of lipid-associated protein sequences and annotations. The initial release contains 2959 records, representing human and mouse proteins involved in lipid metabolism. UniProt IDs were obtained based on keyword search of KEGG and GO databases, and this LMPD protein list was then enhanced with annotations from UniProt, EntrezGene, ENZYME, GO, KEGG and other public resources. We also assigned associations with general lipid categories, based on GO and KEGG annotations. Users may search LMPD by database ID or keyword, and filter by species and/or lipid class associations; from the search results, one can then access a compilation of data relevant to each protein of interest, cross-linked to external databases. The LIPID MAPS Proteome Database (LMPD) is publicly available from the LIPID MAPS Consortium website (http://www.lipidmaps.org/). The direct URL is http://www.lipidmaps.org/data/proteome/index.cgi.
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U2 - 10.1093/nar/gkj122
DO - 10.1093/nar/gkj122
M3 - Article
C2 - 16381922
AN - SCOPUS:33644873676
VL - 34
SP - D507-510
JO - Nucleic Acids Research
JF - Nucleic Acids Research
SN - 0305-1048
IS - Database issue
ER -