TY - JOUR
T1 - QuPath digital immunohistochemical analysis of placental tissue
AU - Hein, Ashley L.
AU - Mukherjee, Maheswari
AU - Talmon, Geoffrey A.
AU - Natarajan, Sathish Kumar
AU - Nordgren, Tara M.
AU - Lyden, Elizabeth
AU - Hanson, Corrine K.
AU - Cox, Jesse L.
AU - Santiago-Pintado, Annelisse
AU - Molani, Mariam A.
AU - Van Ormer, Matthew
AU - Thompson, Maranda
AU - Thoene, Melissa
AU - Akhter, Aunum
AU - Anderson-Berry, Ann
AU - Yuil-Valdes, Ana G.
N1 - Publisher Copyright:
© 2021 Wolters Kluwer Medknow Publications. All rights reserved.
PY - 2021/1/1
Y1 - 2021/1/1
N2 - Background: QuPath is an open-source digital image analyzer notable for its user-friendly design, cross-platform compatibility, and customizable functionality. Since it was first released in 2016, at least 624 publications have reported its use, and it has been applied in a wide spectrum of settings. However, there are currently limited reports of its use in placental tissue. Here, we present the use of QuPath to quantify staining of G-protein coupled receptor 18 (GPR18), the receptor for the pro-resolving lipid mediator Resolvin D2, in placental tissue. Methods: Whole slide images of vascular smooth muscle (VSM) and extravillous trophoblast (EVT) cells stained for GPR18 were annotated for areas of interest. Visual scoring was performed on these images by trained and in-training pathologists, while QuPath scoring was performed with the methodology described herein. Results: Bland-Altman analyses showed that, for the VSM category, the two methods were comparable across all staining levels. For EVT cells, the high-intensity staining level was comparable across methods, but the medium and low staining levels were not comparable. Conclusions: Digital image analysis programs offer great potential to revolutionize pathology practice and research by increasing accuracy and decreasing the time and cost of analysis. Careful study is needed to optimize this methodology further.
AB - Background: QuPath is an open-source digital image analyzer notable for its user-friendly design, cross-platform compatibility, and customizable functionality. Since it was first released in 2016, at least 624 publications have reported its use, and it has been applied in a wide spectrum of settings. However, there are currently limited reports of its use in placental tissue. Here, we present the use of QuPath to quantify staining of G-protein coupled receptor 18 (GPR18), the receptor for the pro-resolving lipid mediator Resolvin D2, in placental tissue. Methods: Whole slide images of vascular smooth muscle (VSM) and extravillous trophoblast (EVT) cells stained for GPR18 were annotated for areas of interest. Visual scoring was performed on these images by trained and in-training pathologists, while QuPath scoring was performed with the methodology described herein. Results: Bland-Altman analyses showed that, for the VSM category, the two methods were comparable across all staining levels. For EVT cells, the high-intensity staining level was comparable across methods, but the medium and low staining levels were not comparable. Conclusions: Digital image analysis programs offer great potential to revolutionize pathology practice and research by increasing accuracy and decreasing the time and cost of analysis. Careful study is needed to optimize this methodology further.
KW - Digital pathology
KW - G-protein coupled receptor 18
KW - QuPath
KW - image analysis
KW - placenta
KW - whole slide image
UR - http://www.scopus.com/inward/record.url?scp=85120936351&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85120936351&partnerID=8YFLogxK
U2 - 10.4103/jpi.jpi-11-21
DO - 10.4103/jpi.jpi-11-21
M3 - Article
AN - SCOPUS:85120936351
SN - 2229-5089
VL - 12
JO - Journal of Pathology Informatics
JF - Journal of Pathology Informatics
IS - 1
M1 - 329731
ER -