TY - JOUR
T1 - Recent advances in epac-targeted therapies
T2 - A biophysical perspective
AU - Ahmed, Alveena
AU - Boulton, Stephen
AU - Shao, Hongzhao
AU - Akimoto, Madoka
AU - Natarajan, Amarnath
AU - Cheng, Xiaodong
AU - Melacini, Giuseppe
N1 - Publisher Copyright:
© MDPI AG. All rights reserved.
PY - 2019/11
Y1 - 2019/11
N2 - The universal second messenger cAMP regulates diverse intracellular processes by interacting with ubiquitously expressed proteins, such as Protein Kinase A (PKA) and the Exchange Protein directly Activated by cAMP (EPAC). EPAC is implicated in multiple pathologies, thus several EPAC-specific inhibitors have been identified in recent years. However, the mechanisms and molecular interactions underlying the EPAC inhibition elicited by such compounds are still poorly understood. Additionally, being hydrophobic low molecular weight species, EPAC-specific inhibitors are prone to forming colloidal aggregates, which result in non-specific aggregation-based inhibition (ABI) in aqueous systems. Here, we review from a biophysical perspective the molecular basis of the specific and non-specific interactions of two EPAC antagonists—CE3F4R, a non-competitive inhibitor, and ESI-09, a competitive inhibitor of EPAC. Additionally, we discuss the value of common ABI attenuators (e.g., TX and HSA) to reduce false positives at the expense of introducing false negatives when screening aggregation-prone compounds. We hope this review provides the EPAC community effective criteria to evaluate similar compounds, aiding in the optimization of existing drug leads, and informing the development of the next generation of EPAC-specific inhibitors.
AB - The universal second messenger cAMP regulates diverse intracellular processes by interacting with ubiquitously expressed proteins, such as Protein Kinase A (PKA) and the Exchange Protein directly Activated by cAMP (EPAC). EPAC is implicated in multiple pathologies, thus several EPAC-specific inhibitors have been identified in recent years. However, the mechanisms and molecular interactions underlying the EPAC inhibition elicited by such compounds are still poorly understood. Additionally, being hydrophobic low molecular weight species, EPAC-specific inhibitors are prone to forming colloidal aggregates, which result in non-specific aggregation-based inhibition (ABI) in aqueous systems. Here, we review from a biophysical perspective the molecular basis of the specific and non-specific interactions of two EPAC antagonists—CE3F4R, a non-competitive inhibitor, and ESI-09, a competitive inhibitor of EPAC. Additionally, we discuss the value of common ABI attenuators (e.g., TX and HSA) to reduce false positives at the expense of introducing false negatives when screening aggregation-prone compounds. We hope this review provides the EPAC community effective criteria to evaluate similar compounds, aiding in the optimization of existing drug leads, and informing the development of the next generation of EPAC-specific inhibitors.
KW - Aggregation-based inhibition
KW - Allostery
KW - CAMP
KW - Drug design
KW - Dynamics
KW - EPAC
KW - NMR
KW - Protein-ligand binding
KW - Screening
KW - Signaling
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U2 - 10.3390/cells8111462
DO - 10.3390/cells8111462
M3 - Article
C2 - 31752286
AN - SCOPUS:85084036997
SN - 2073-4409
VL - 8
JO - Cells
JF - Cells
IS - 11
M1 - 1462
ER -